Ultrasequencing of the meiofaunal biosphere: practice, pitfalls and promises S Creer*, VG Fonseca*, DL Porazinska, RM Giblin‐Davis, W Sung, ... Molecular Ecology 19 (s1), 4-20, 2010 | 412 | 2010 |
Second-generation environmental sequencing unmasks marine metazoan biodiversity VG Fonseca, GR Carvalho, W Sung, HF Johnson, DM Power, SP Neill, ... Nature communications 1 (1), 98, 2010 | 386 | 2010 |
DNAqua-Net: Developing new genetic tools for bioassessment and monitoring of aquatic ecosystems in Europe F Leese, F Altermatt, A Bouchez, T Ekrem, D Hering, K Meissner, ... Research Ideas and Outcomes 2, e11321, 2016 | 165 | 2016 |
Environmental metabarcoding reveals heterogeneous drivers of microbial eukaryote diversity in contrasting estuarine ecosystems D Lallias, JG Hiddink, VG Fonseca, JM Gaspar, W Sung, SP Neill, ... The ISME journal 9 (5), 1208-1221, 2015 | 135 | 2015 |
Metagenetic analysis of patterns of distribution and diversity of marine meiobenthic eukaryotes VG Fonseca, GR Carvalho, B Nichols, C Quince, HF Johnson, SP Neill, ... Global Ecology and Biogeography 23 (11), 1293-1302, 2014 | 117 | 2014 |
A practical guide to DNA-based methods for biodiversity assessment. K Bruce, RC Blackman, SJ Bourlat, M Hellström, J Bakker, I Bista, ... Pensoft Advanced Books, 2021 | 106 | 2021 |
Pitfalls in relative abundance estimation using eDNA metabarcoding VG Fonseca Molecular Ecology Resources 18 (5), 2018 | 106 | 2018 |
Sample richness and genetic diversity as drivers of chimera formation in nSSU metagenetic analyses VG Fonseca, B Nichols, D Lallias, C Quince, GR Carvalho, DM Power, ... Nucleic acids research 40 (9), e66-e66, 2012 | 96 | 2012 |
Towards a multisensor station for automated biodiversity monitoring JW Wägele, P Bodesheim, SJ Bourlat, J Denzler, M Diepenbroek, ... Basic and Applied Ecology 59, 105-138, 2022 | 64 | 2022 |
Comparing diversity levels in environmental samples: DNA sequence capture and metabarcoding approaches using 18S and COI genes H Giebner, K Langen, SJ Bourlat, S Kukowka, C Mayer, JJ Astrin, B Misof, ... Molecular Ecology Resources 20 (5), 1333-1345, 2020 | 61 | 2020 |
Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach VG Fonseca, F Sinniger, JM Gaspar, C Quince, S Creer, DM Power, ... Scientific reports 7 (1), 6094, 2017 | 61 | 2017 |
Individual relationship between aneuploidy of gill cells and growth rate in the cupped oysters Crassostrea angulata, C. gigas and their reciprocal hybrids FM Batista, A Leitão, VG Fonseca, R Ben-Hamadou, F Ruano, ... Journal of Experimental Marine Biology and Ecology 352 (1), 226-233, 2007 | 40 | 2007 |
Metabarcoding Malaise traps and soil eDNA reveals seasonal and local arthropod diversity shifts A Kirse, SJ Bourlat, K Langen, VG Fonseca Scientific reports 11 (1), 10498, 2021 | 39 | 2021 |
Feeding and the rhodopsin family g-protein coupled receptors in nematodes and arthropods JCR Cardoso, RC Félix, VG Fonseca, DM Power Frontiers in endocrinology 3, 157, 2012 | 39 | 2012 |
Systematic review and meta‐analysis: Water type and temperature affect environmental DNA decay PD Lamb, VG Fonseca, DL Maxwell, CC Nnanatu Molecular Ecology Resources 22 (7), 2494-2505, 2022 | 36 | 2022 |
Assessing insect biodiversity with automatic light traps in Brazil: Pearls and pitfalls of metabarcoding samples in preservative ethanol MM Zenker, A Specht, VG Fonseca Ecology and Evolution, 15, 2020 | 36 | 2020 |
Identification of an osteopontin‐like protein in fish associated with mineral formation VG Fonseca, V Laizé, MS Valente, ML Cancela The FEBS Journal 274 (17), 4428-4439, 2007 | 36 | 2007 |
The application of nanopore sequencing technology to the study of dinoflagellates: a proof of concept study for rapid sequence-based discrimination of potentially harmful algae RG Hatfield, FM Batista, TP Bean, VG Fonseca, A Santos, AD Turner, ... Frontiers in Microbiology 11, 844, 2020 | 33 | 2020 |
Spatial and temporal dynamics of Antarctic shallow soft‑bottom benthic communities: ecological drivers under climate change BJ Vause, SA Morley, VG Fonseca, A Jażdżewska, GV Ashton, ... BMC Ecology 19 (27), 14, 2019 | 32 | 2019 |
Unravelling the evolution of the allatostatin-type A, KISS and galanin peptide-receptor gene families in bilaterians: insights from Anopheles mosquitoes RC Felix, M Trindade, IRP Pires, VG Fonseca, RS Martins, H Silveira, ... PLoS One 10 (7), e0130347, 2015 | 32 | 2015 |