| A year of genomic surveillance reveals how the SARS-CoV-2 pandemic unfolded in Africa E Wilkinson, M Giovanetti, H Tegally, JE San, R Lessells, D Cuadros, ... Science 374 (6566), 423-431, 2021 | 191 | 2021 |
| The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance H Tegally, JE San, M Cotten, M Moir, B Tegomoh, G Mboowa, DP Martin, ... Science 378 (6615), eabq5358, 2022 | 94 | 2022 |
| Optimization of the SARS-CoV-2 ARTIC network V4 primers and whole genome sequencing protocol AW Lambisia, KS Mohammed, TO Makori, L Ndwiga, MW Mburu, ... Frontiers in Medicine 9, 836728, 2022 | 59 | 2022 |
| Pooled testing conserves SARS-CoV-2 laboratory resources and improves test turn-around time: experience on the Kenyan Coast CN Agoti, M Mutunga, AW Lambisia, D Kimani, R Cheruiyot, P Kiyuka, ... Wellcome open research 5, 2020 | 24 | 2020 |
| Epidemiological trends of five common diarrhea-associated enteric viruses pre-and post-rotavirus vaccine introduction in coastal Kenya AW Lambisia, S Onchaga, N Murunga, CS Lewa, SG Nyanjom, CN Agoti Pathogens 9 (8), 660, 2020 | 23 | 2020 |
| An optimization of four SARS-CoV-2 qRT-PCR assays in a Kenyan laboratory to support the national COVID-19 rapid response teams KS Mohammed, ZR de Laurent, DO Omuoyo, C Lewa, E Gicheru, ... Wellcome open research 5, 2020 | 13 | 2020 |
| Transmission networks of SARS-CoV-2 in Coastal Kenya during the first two waves: A retrospective genomic study CN Agoti, LI Ochola-Oyier, S Dellicour, KS Mohammed, AW Lambisia, ... Elife 11, e71703, 2022 | 11 | 2022 |
| Detection of SARS-CoV-2 variant 501Y. V2 in comoros islands in January 2021 CN Agoti, G Githinji, KS Mohammed, AW Lambisia, ZR de Laurent, ... Wellcome Open Research 6, 2021 | 8 | 2021 |
| Differences in epidemiology of enteropathogens in children pre-and post-rotavirus vaccine introduction in Kilifi, coastal Kenya CN Agoti, MD Curran, N Murunga, M Ngari, E Muthumbi, AW Lambisia, ... Gut Pathogens 14 (1), 32, 2022 | 5 | 2022 |
| Genomic epidemiology of SARS-CoV-2 in Seychelles, 2020–2021 JM Morobe, B Pool, L Marie, D Didon, AW Lambisia, T Makori, ... Viruses 14 (6), 1318, 2022 | 5 | 2022 |
| Genomic epidemiology of human adenovirus F40 and F41 in coastal Kenya: A retrospective hospital-based surveillance study (2013–2022) AW Lambisia, TO Makori, M Mutunga, R Cheruiyot, N Murunga, J Quick, ... Virus evolution 9 (1), vead023, 2023 | 4 | 2023 |
| The genomic epidemiology of SARS-CoV-2 variants of concern in Kenya G Githinji, AW Lambisia, I Omah, A O’Toole, KS Mohamed, ZR de Laurent, ... medRxiv, 2022.10. 26.22281446, 2022 | 4 | 2022 |
| Genomic surveillance reveals the spread patterns of SARS-CoV-2 in coastal Kenya during the first two waves CN Agoti, LI Ochola-Oyier, KS Mohammed, AW Lambisia, ZR de Laurent, ... | 4 | 2021 |
| Temporal changes in the positivity rate of common enteric viruses among paediatric admissions in coastal Kenya, during the COVID-19 pandemic, 2019–2022 AW Lambisia, N Murunga, M Mutunga, R Cheruiyot, G Maina, TO Makori, ... Gut Pathogens 16 (1), 2, 2024 | 3 | 2024 |
| Comparison of the Diagnostic Performance of TaqMan Array Cards, Enzyme Immunoassay, Real-Time PCR and Next Generation Sequencing in Investigation of Five Common Diarrhoea … AW Lambisia JKUAT-COHES, 2021 | 2 | 2021 |
| Temporal distribution and clinical characteristics of the Alpha, Delta and Omicron SARS-CoV-2 variants of concern in Laikipia, Kenya: institutional and community-based genomic … AW Lambisia, GH Mudhune, JM Morobe, KS Mohammed, TO Makori, ... Wellcome Open Research 7 (235), 235, 2023 | 1 | 2023 |
| Detection of a SARS-CoV-2 Beta-like variant in coastal Kenya after more than a year of disappearance AW Lambisia, JU Nyiro, JM Morobe, TN Makori, MW Mburu, L Ndwiga, ... Wellcome Open Research 8 (34), 34, 2023 | 1 | 2023 |
| Genomic epidemiology of the rotavirus G2P [4] strains in coastal Kenya pre-and post-rotavirus vaccine introduction, 2012–8 TO Makori, JL Bargul, AW Lambisia, MJ Mwanga, N Murunga, ... Virus Evolution 9 (1), vead025, 2023 | 1 | 2023 |
| Genomic epidemiology of SARS-CoV-2 within households in coastal Kenya: a case ascertained cohort study CN Agoti, KE Gallagher, J Nyiro, AW Lambisia, N Murunga, ... medRxiv, 2022.10. 26.22281455, 2022 | 1 | 2022 |
| Near-Complete Genome Sequences of Eight Human Astroviruses Recovered from Diarrheal Stool Samples of Hospitalized Children in Coastal Kenya in 2019 AW Lambisia, MVT Phan, ZR de Laurent, M Cotten, DJ Nokes, CN Agoti Microbiology resource announcements 10 (15), 10.1128/mra. 00162-21, 2021 | 1 | 2021 |
