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João Saraiva
João Saraiva
Post Doctorate
在 ufz.de 的电子邮件经过验证
标题
引用次数
引用次数
年份
Marine probiotics: increasing coral resistance to bleaching through microbiome manipulation
PM Rosado, DCA Leite, GAS Duarte, RM Chaloub, G Jospin, ...
The ISME journal 13 (4), 921-936, 2019
3282019
Complementary roles of wood-inhabiting fungi and bacteria facilitate deadwood decomposition
V Tláskal, V Brabcová, T Větrovský, M Jomura, R López-Mondéjar, ...
Msystems 6 (1), 10.1128/msystems. 01078-20, 2021
872021
Metagenomic insights into the taxonomy, function, and dysbiosis of prokaryotic communities in octocorals
T Keller-Costa, A Lago-Lestón, JP Saraiva, R Toscan, SG Silva, ...
Microbiome 9, 1-21, 2021
502021
TerrestrialMetagenomeDB: a public repository of curated and standardized metadata for terrestrial metagenomes
FB Corrêa, JP Saraiva, PF Stadler, UN da Rocha
Nucleic acids research 48 (D1), D626-D632, 2020
452020
iDS372, a Phenotypically Reconciled Model for the Metabolism of Streptococcus pneumoniae Strain R6
O Dias, J Saraiva, C Faria, M Ramirez, F Pinto, I Rocha
Frontiers in Microbiology 10, 1283, 2019
232019
Machine learning-assisted identification of bioindicators predicts medium-chain carboxylate production performance of an anaerobic mixed culture
B Liu, H Sträuber, J Saraiva, H Harms, SG Silva, JC Kasmanas, ...
Microbiome 10 (1), 48, 2022
222022
Biotransformation of hexachlorocyclohexanes contaminated biomass for energetic utilization demonstrated in continuous anaerobic digestion system
S Lian, M Nikolausz, I Nijenhuis, UN da Rocha, B Liu, FB Corrêa, ...
Journal of hazardous materials 384, 121448, 2020
192020
Complementary roles of wood-inhabiting fungi and bacteria facilitate deadwood decomposition. mSystems, 6 (1), e01078-20
V Tláskal, V Brabcová, T Větrovský, M Jomura, R López-Mondéjar, ...
132021
Mining synergistic microbial interactions: a roadmap on how to integrate multi-omics data
JP Saraiva, A Worrich, C Karakoç, R Kallies, A Chatzinotas, F Centler, ...
Microorganisms 9 (4), 840, 2021
122021
MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes
MK Nata’ala, AP Avila Santos, J Coelho Kasmanas, A Bartholomäus, ...
Environmental Microbiome 17 (1), 57, 2022
102022
Complementary roles of wood-inhabiting fungi and bacteria facilitate deadwood decomposition. mSystems 6
V Tláskal, V Brabcová, T Větrovský, M Jomura, R López-Mondéjar, ...
102021
Recovery of 197 eukaryotic bins reveals major challenges for eukaryote genome reconstruction from terrestrial metagenomes
JP Saraiva, A Bartholomäus, RB Toscan, P Baldrian, U Nunes da Rocha
Molecular Ecology Resources 23 (5), 1066-1076, 2023
92023
PredicTF: prediction of bacterial transcription factors in complex microbial communities using deep learning
LM Oliveira Monteiro, JP Saraiva, R Brizola Toscan, PF Stadler, ...
Environmental Microbiome 17 (1), 7, 2022
92022
MuDoGeR: Multi-domain genome recovery from metagenomes made easy
UN da Rocha, JC Kasmanas, R Kallies, JP Saraiva, RB Toscan, ...
bioRxiv, 2022.06. 21.496983, 2022
82022
Metagenomes, metatranscriptomes and microbiomes of naturally decomposing deadwood
V Tláskal, V Brabcová, T Větrovský, R López-Mondéjar, LMO Monteiro, ...
Scientific data 8 (1), 198, 2021
82021
Combining flow cytometry and metagenomics improves recovery of metagenome-assembled genomes in a cell culture from activated sludge
N Abdulkadir, JP Saraiva, F Schattenberg, RB Toscan, F Borim Correa, ...
Microorganisms 11 (1), 175, 2023
62023
Combination of classifiers identifies fungal-specific activation of lysosome genes in human monocytes
JP Leonor Fernandes Saraiva, C Zubiria-Barrera, TE Klassert, ...
Frontiers in Microbiology 8, 2366, 2017
52017
Metagenome-assembled genomes indicate that antimicrobial resistance genes are highly prevalent among urban bacteria and multidrug and glycopeptide resistances are ubiquitous in …
S Magnúsdóttir, JP Saraiva, A Bartholomäus, M Soheili, RB Toscan, ...
Frontiers in Microbiology 14, 1037845, 2023
42023
OrtSuite: from genomes to prediction of microbial interactions within targeted ecosystem processes
JP Saraiva, A Bartholomäus, R Kallies, M Gomes, M Bicalho, ...
Life science alliance 4 (12), 2021
42021
Fungal biomarker discovery by integration of classifiers
JP Saraiva, M Oswald, A Biering, D Röll, C Assmann, T Klassert, M Blaess, ...
BMC genomics 18, 1-11, 2017
42017
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