Genetic and epidemiologic trends of norovirus outbreaks in the United States from 2013 to 2016 demonstrated emergence of novel GII. 4 recombinant viruses JL Cannon, L Barclay, NR Collins, ME Wikswo, CJ Castro, LC Magaña, ... Journal of clinical microbiology 55 (7), 2208-2221, 2017 | 292 | 2017 |
High variety of known and new RNA and DNA viruses of diverse origins in untreated sewage TFF Ng, R Marine, C Wang, P Simmonds, B Kapusinszky, L Bodhidatta, ... Journal of virology 86 (22), 12161-12175, 2012 | 279 | 2012 |
Evaluation of a transposase protocol for rapid generation of shotgun high-throughput sequencing libraries from nanogram quantities of DNA R Marine, SW Polson, J Ravel, G Hatfull, D Russell, M Sullivan, F Syed, ... Applied and environmental microbiology 77 (22), 8071-8079, 2011 | 154 | 2011 |
Caught in the middle with multiple displacement amplification: the myth of pooling for avoiding multiple displacement amplification bias in a metagenome R Marine, C McCarren, V Vorrasane, D Nasko, E Crowgey, SW Polson, ... Microbiome 2, 1-8, 2014 | 114 | 2014 |
Pan-viral serology implicates enteroviruses in acute flaccid myelitis RD Schubert, IA Hawes, PS Ramachandran, A Ramesh, ED Crawford, ... Nature medicine 25 (11), 1748-1752, 2019 | 99 | 2019 |
Antibodies to enteroviruses in cerebrospinal fluid of patients with acute flaccid myelitis N Mishra, TFF Ng, RL Marine, K Jain, J Ng, R Thakkar, A Caciula, A Price, ... MBio 10 (4), 10.1128/mbio. 01903-19, 2019 | 69 | 2019 |
Genetic diversity of human sapovirus across the Americas M Diez-Valcarce, CJ Castro, RL Marine, N Halasa, H Mayta, M Saito, ... Journal of Clinical Virology 104, 65-72, 2018 | 51 | 2018 |
Wastewater testing and detection of poliovirus type 2 genetically linked to virus isolated from a paralytic polio case—New York, March 9–October 11, 2022 AB Ryerson MMWR. Morbidity and Mortality Weekly Report 71, 2022 | 46 | 2022 |
Comparison of Illumina MiSeq and the Ion Torrent PGM and S5 platforms for whole-genome sequencing of picornaviruses and caliciviruses RL Marine, LC Magaña, CJ Castro, K Zhao, AM Montmayeur, A Schmidt, ... Journal of virological methods 280, 113865, 2020 | 32 | 2020 |
Novel chaperonins are prevalent in the virioplankton and demonstrate links to viral biology and ecology RL Marine, DJ Nasko, J Wray, SW Polson, KE Wommack The ISME journal 11 (11), 2479-2491, 2017 | 28 | 2017 |
Near-complete genome sequences of several new norovirus genogroup II genotypes P Chhabra, K Aswath, N Collins, T Ahmed, MP Olórtegui, M Kosek, ... Genome Announcements 6 (6), 10.1128/genomea. 00007-18, 2018 | 24 | 2018 |
Detection and genomic characterization of enterovirus D68 in respiratory samples isolated in the United States in 2016 TFF Ng, A Montmayeur, C Castro, M Cone, J Stringer, DM Lamson, ... Genome announcements 4 (6), 10.1128/genomea. 01350-16, 2016 | 18 | 2016 |
Next-generation sequencing of human respiratory syncytial virus subgroups A and B genomes L Wang, TFF Ng, CJ Castro, RL Marine, LC Magaña, M Esona, TCT Peret, ... Journal of Virological Methods 299, 114335, 2022 | 12 | 2022 |
VPipe: An automated bioinformatics platform for assembly and management of viral next-generation sequencing data DD Wagner, RL Marine, E Ramos, TFF Ng, CJ Castro, ... Microbiology Spectrum 10 (2), e02564-21, 2022 | 10 | 2022 |
The effect of variant interference on de novo assembly for viral deep sequencing CJ Castro, RL Marine, E Ramos, TFF Ng BMC genomics 21, 1-12, 2020 | 8 | 2020 |
Complete genome sequences of mumps and measles virus isolates from three states in the United States LC Magaña, A Espinosa, RL Marine, TFF Ng, CJ Castro, AM Montmayeur, ... Genome announcements 5 (33), 10.1128/genomea. 00748-17, 2017 | 8 | 2017 |
Household transmission and symptomology of severe acute respiratory syndrome coronavirus 2 Alpha variant among children—California and Colorado, 2021 MA Waltenburg, MJ Whaley, RJ Chancey, MAP Donnelly, MR Chuey, ... The Journal of Pediatrics 247, 29-37. e7, 2022 | 7 | 2022 |
Genome sequences of rhinovirus genotype C56 detected in three patients with acute respiratory illness, California, 2016 to 2017 CY Pan, S Yagi, T Padilla, TFF Ng, RL Marine, WA Nix, DA Wadford Microbiology resource announcements 7 (7), 10.1128/mra. 00982-18, 2018 | 6 | 2018 |
Complete genome sequences of human astrovirus prototype strains (types 1 to 8) CJ Castro, E Reynolds, SS Monroe, RL Marine, J Vinjé Microbiology Resource Announcements 8 (7), 10.1128/mra. 01611-18, 2019 | 4 | 2019 |
Genomic characterization of three melon necrotic spot viruses detected in human stool specimens R Marine, C Castro, L Magaña, TFF Ng, K Aswath, N Collins, GW Park, ... Genome Announcements 5 (11), 10.1128/genomea. 01758-16, 2017 | 4 | 2017 |