Ab initio RNA folding by discrete molecular dynamics: from structure prediction to folding mechanisms F Ding, S Sharma, P Chalasani, VV Demidov, NE Broude, NV Dokholyan Rna 14 (6), 1164-1173, 2008 | 315 | 2008 |
iFoldRNA: three-dimensional RNA structure prediction and folding S Sharma, F Ding, NV Dokholyan Bioinformatics 24 (17), 1951-1952, 2008 | 264 | 2008 |
Protein folding: Then and now Y Chen, F Ding, H Nie, AW Serohijos, S Sharma, KC Wilcox, S Yin, ... Archives of biochemistry and biophysics 469 (1), 4-19, 2008 | 155 | 2008 |
Multiscale modeling of nucleosome dynamics S Sharma, F Ding, NV Dokholyan Biophysical journal 92 (5), 1457-1470, 2007 | 132 | 2007 |
Molecular dynamic simulations of cisplatin-and oxaliplatin-d (GG) intrastand cross-links reveal differences in their conformational dynamics S Sharma, P Gong, B Temple, D Bhattacharyya, NV Dokholyan, ... Journal of molecular biology 373 (5), 1123-1140, 2007 | 64 | 2007 |
Structure alignment via Delaunay tetrahedralization J Roach, S Sharma, M Kapustina, CW Carter Jr Proteins: Structure, Function, and Bioinformatics 60 (1), 66-81, 2005 | 51 | 2005 |
The path of DNA in the kinetochore K Bloom, S Sharma, NV Dokholyan Current biology: CB 16 (8), R276, 2006 | 48 | 2006 |
iFold: a platform for interactive folding simulations of proteins S Sharma, F Ding, H Nie, D Watson, A Unnithan, J Lopp, D Pozefsky, ... Bioinformatics 22 (21), 2693-2694, 2006 | 39 | 2006 |
Probing protein aggregation using simplified models and discrete molecular dynamics S Sharma, F Ding, NV Dokholyan Frontiers in bioscience: a journal and virtual library 13, 4795, 2008 | 29 | 2008 |
Flanking bases influence the nature of DNA distortion by platinum 1, 2-intrastrand (GG) cross-links D Bhattacharyya, S Ramachandran, S Sharma, W Pathmasiri, CL King, ... PLoS one 6 (8), e23582, 2011 | 28 | 2011 |
Best practices in Biotechnology education Y Friedman Logos Press, 2008 | 5 | 2008 |
DNA sequence mediates nucleosome structure and stability S Sharma, NV Dokholyan Biophysical journal 94 (1), 1-3, 2008 | 4 | 2008 |
Differences in conformation and conformational dynamics between cisplatin and oxaliplatin DNA adducts SG Chaney, S Ramachandran, S Sharma, NV Dokholyan, B Temple, ... Platinum and Other Heavy Metal Compounds in Cancer Chemotherapy: Molecular …, 2009 | 1 | 2009 |
Predictive Imaging-Genetics Models with Feature Selection and Dimension Reduction Using Sparse Partial Least Squares MP Rui Li, Xiaojie Huang, Shantanu Sharma MICGen: International Workshop on Imaging Genetics, 2014 | | 2014 |
Feature Selection and Imaging-Genetics Predictions Using a Sparse, Extremely Randomized Forest Regressor A Montillo, S Sharma, M Prastawa MICGen: International Workshop on Imaging Genetics, 2014 | | 2014 |
Computational modeling and automation techniques to study biomolecular dynamics S Sharma The University of North Carolina at Chapel Hill, 2009 | | 2009 |
AAB: A generalized Java-based Algorithm Animator Builder. S Sharma, V Chaudhary Proceedings of the Fifth International Conference of Information Technology …, 2002 | | 2002 |