Critical comparison of biomembrane force fields: protein–lipid interactions at the membrane interface A Sandoval-Perez, K Pluhackova, RA Böckmann Journal of Chemical Theory and Computation 13 (5), 2310-2321, 2017 | 73 | 2017 |
Cysteine oxidation in proteins: structure, biophysics, and simulation D Garrido Ruiz, A Sandoval-Perez, AV Rangarajan, EL Gunderson, ... Biochemistry 61 (20), 2165-2176, 2022 | 53 | 2022 |
A parallel multi-objective ab initio approach for protein structure prediction D Becerra, A Sandoval, D Restrepo-Montoya, FN Luis 2010 IEEE international conference on bioinformatics and biomedicine (BIBM …, 2010 | 31 | 2010 |
DNA binds to a specific site of the adhesive blood-protein von Willebrand factor guided by electrostatic interactions A Sandoval-Pérez, RML Berger, A Garaizar, SE Farr, MA Brehm, G König, ... Nucleic Acids Research, 2020 | 21 | 2020 |
The molecular switching mechanism at the conserved D (E) RY motif in class-A GPCRs A Sandoval, S Eichler, S Madathil, PJ Reeves, K Fahmy, RA Böckmann Biophysical journal 111 (1), 79-89, 2016 | 19 | 2016 |
A multi-objective optimization energy approach to predict the ligand conformation in a docking process A Sandoval-Perez, D Becerra, D Vanegas, D Restrepo-Montoya, F Nino Genetic Programming: 16th European Conference, EuroGP 2013, Vienna, Austria …, 2013 | 16 | 2013 |
Mutations in α-synuclein, TDP-43 and tau prolong protein half-life through diminished degradation by lysosomal proteases PJ Sampognaro, S Arya, GM Knudsen, EL Gunderson, A Sandoval-Perez, ... Molecular neurodegeneration 18 (1), 29, 2023 | 12 | 2023 |
Cholesterol Localization around the Metabotropic Glutamate Receptor 2 M Kurth, F Lolicato, A Sandoval-Perez, H Amaya-Espinosa, A Teslenko, ... The Journal of Physical Chemistry B 124 (41), 9061-9078, 2020 | 8 | 2020 |
Integration of genomic sequencing drives therapeutic targeting of PDGFRA in T-cell acute lymphoblastic leukemia/lymphoblastic lymphoma J Paolino, B Dimitrov, B Apsel Winger, A Sandoval-Perez, AV Rangarajan, ... Clinical Cancer Research 29 (22), 4613-4626, 2023 | 1 | 2023 |
Thermodynamic stabilization of von Willebrand factor A1 domain induces protein loss of function A Sandoval‐Pérez, V Mejía‐Restrepo, C Aponte‐Santamaría Proteins: Structure, Function, and Bioinformatics 90 (12), 2058-2066, 2022 | 1 | 2022 |
Assessing the Activation of Tyrosine Kinase KIT through Free Energy Calculations A Sandoval-Pérez, BA Winger, MP Jacobson Journal of chemical theory and computation 18 (10), 6251-6258, 2022 | 1 | 2022 |
Specificity of the Lysosomal Proteases in the Degradation of.-synuclein, Tau, and TDP43: Implications for Neurodegenerative Disease PJ Sampognaro, S Arya, GM Knudsen, EL Gunderson, A Sandoval-Perez, ... ANNALS OF NEUROLOGY 92, S160-S161, 2022 | | 2022 |
Mutations in α-synuclein, TDP-43 and tau prolong protein half-life through diminished degradation by lysosomal proteases A Kao, P Sampognaro, S Arya, G Knudsen, E Gunderson, ... | | 2022 |
Thermodynamic stabilization of the von Willebrand Factor A1 domain due to loss-of-function disease-related mutations A Sandoval-Pérez, V Mejía-Restrepo, C Aponte-Santamaría bioRxiv, 2022.03. 10.483861, 2022 | | 2022 |
Cholesterol Controls Dynamics of the Metabotropic Glutamate Receptor 2 via an Ionic-Lock A Sandoval-Perez Biophysical Journal 118 (3), 212a, 2020 | | 2020 |
Specific at One Side While Unspecific at the Other: the Interaction of a Blood Protein with Extracellular DNA A Sandoval-Perez, CA Aponte-Santamaria Biophysical Journal 116 (3), 215a, 2019 | | 2019 |
Proton-induced conformational switching in GPCRs is tailored to the membrane interface A Sandoval, S Eichler, S Madathil, P Reeves, RA Boeckmann, K Fahmy EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 46, S109-S109, 2017 | | 2017 |
Biomolecular force field comparison: Protein-lipid interactions at the membrane interface A Sandoval-Perez, K Pluhackova, RA Boeckmann EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 46, S229-S229, 2017 | | 2017 |
Lipid-protein interactions at the membrane interface: Lipid-Protein Wechselwirkungen an der Membrangrenzfläche A Sandoval-Perez Friedrich-Alexander-Universität Erlangen-Nürnberg, 2017 | | 2017 |
Effect of cholesterol on membrane-embedded A beta-Amyloids A Sandoval-Perez, M Pannuzzo, RA Boeckmann EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 44, S173-S173, 2015 | | 2015 |