| AnnoTree: visualization and exploration of a functionally annotated microbial tree of life K Mendler, H Chen, DH Parks, B Lobb, LA Hug, AC Doxey Nucleic acids research 47 (9), 4442-4448, 2019 | 233 | 2019 |
| Gene expression and in situ protein profiling of candidate SARS-CoV-2 receptors in human airway epithelial cells and lung tissue JA Aguiar, BJM Tremblay, MJ Mansfield, O Woody, B Lobb, A Banerjee, ... European Respiratory Journal 56 (3), 2020 | 182 | 2020 |
| An assessment of genome annotation coverage across the bacterial tree of life B Lobb, BJM Tremblay, G Moreno-Hagelsieb, AC Doxey Microbial Genomics 6 (3), e000341, 2020 | 88 | 2020 |
| The impact of cigarette smoke exposure, COPD, or asthma status on ABC transporter gene expression in human airway epithelial cells JA Aguiar, A Tamminga, B Lobb, RD Huff, JP Nguyen, Y Kim, ... Scientific reports 9 (1), 153, 2019 | 42 | 2019 |
| MetAnnotate: function-specific taxonomic profiling and comparison of metagenomes P Petrenko, B Lobb, DA Kurtz, JD Neufeld, AC Doxey BMC biology 13, 1-8, 2015 | 42 | 2015 |
| Remote homology and the functions of metagenomic dark matter B Lobb, DA Kurtz, G Moreno-Hagelsieb, AC Doxey Frontiers in genetics 6, 141166, 2015 | 42 | 2015 |
| Novel function discovery through sequence and structural data mining B Lobb, AC Doxey Current opinion in structural biology 38, 53-61, 2016 | 41 | 2016 |
| Time series resolution of the fish necrobiome reveals a decomposer succession involving toxigenic bacterial pathogens B Lobb, R Hodgson, MDJ Lynch, MJ Mansfield, J Cheng, TC Charles, ... MSystems 5 (2), 10.1128/msystems. 00145-20, 2020 | 20 | 2020 |
| PhyloCorrelate: inferring bacterial gene–gene functional associations through large-scale phylogenetic profiling BJM Tremblay, B Lobb, AC Doxey Bioinformatics 37 (1), 17-22, 2021 | 18 | 2021 |
| Draft genome sequences of two novel cellulolytic streptomyces strains isolated from South African rhizosphere soil MF Adegboye, B Lobb, OO Babalola, AC Doxey, K Ma Genome Announcements 6 (26), 10.1128/genomea. 00632-18, 2018 | 11 | 2018 |
| Genomic and transcriptomic characterization of Delta SARS-CoV-2 infection in free-ranging white-tailed deer (Odocoileus virginianus) JD Kotwa, B Lobb, A Massé, M Gagnier, P Aftanas, A Banerjee, A Banete, ... Iscience 26 (11), 2023 | 7 | 2023 |
| Ancient Clostridium DNA and variants of tetanus neurotoxins associated with human archaeological remains HP Hodgins, P Chen, B Lobb, X Wei, BJM Tremblay, MJ Mansfield, ... Nature Communications 14 (1), 5475, 2023 | 6 | 2023 |
| Identification of divergent botulinum neurotoxin homologs in Paeniclostridium ghonii X Wei, T Wentz, B Lobb, MJ Mansfield, W Zhen, H Tan, Z Wu, S Pellett, ... bioRxiv, 2022.08. 17.504336, 2022 | 6 | 2022 |
| Slr4, a newly identified S‐layer protein from marine Gammaproteobacteria, is a major biofilm matrix component S Ali, B Jenkins, J Cheng, B Lobb, X Wei, S Egan, TC Charles, ... Molecular microbiology 114 (6), 979-990, 2020 | 6 | 2020 |
| Exploring the Evolution of Virulence Factors through Bioinformatic Data Mining AC Doxey, MJ Mansfield, B Lobb mSystems 4 (3), e00162-19, 2019 | 6 | 2019 |
| PathFams: statistical detection of pathogen-associated protein domains B Lobb, BJM Tremblay, G Moreno-Hagelsieb, AC Doxey BMC genomics 22, 1-11, 2021 | 3 | 2021 |
| Metagenomic sequencing of wastewater from a South African research farm B Lobb, AA Adegoke, K Ma, AC Doxey, OA Aiyegoro Microbiology Resource Announcements 7 (16), 10.1128/mra. 01323-18, 2018 | 3 | 2018 |
| AnnoView enables large-scale analysis, comparison, and visualization of microbial gene neighborhoods X Wei, H Tan, B Lobb, W Zhen, Z Wu, DH Parks, JD Neufeld, ... Briefings in Bioinformatics 25 (3), bbae229, 2024 | 2 | 2024 |
| Phylogenomic Analysis of 155 Helminth Species Reveals Widespread Absence of Oxygen Metabolic Capacity E Collington, B Lobb, NA Mazen, AC Doxey, DM Glerum Genome Biology and Evolution 15 (8), evad135, 2023 | 2 | 2023 |
| Genomic classification and antimicrobial resistance profiling of Streptococcus pneumoniae and Haemophilus influenzae isolates associated with paediatric otitis … B Lobb, MC Lee, CL McElheny, Y Doi, K Yahner, A Hoberman, JM Martin, ... BMC Infectious Diseases 23 (1), 596, 2023 | 1 | 2023 |
