Tempo and mode of genome evolution in the budding yeast subphylum XX Shen, DA Opulente, J Kominek, X Zhou, JL Steenwyk, KV Buh, ... Cell 175 (6), 1533-1545. e20, 2018 | 454 | 2018 |
Comparative genomics of biotechnologically important yeasts R Riley, S Haridas, KH Wolfe, MR Lopes, CT Hittinger, M Göker, ... Proceedings of the National Academy of Sciences 113 (35), 9882-9887, 2016 | 327 | 2016 |
A global coexpression network approach for connecting genes to specialized metabolic pathways in plants JH Wisecaver, AT Borowsky, V Tzin, G Jander, DJ Kliebenstein, A Rokas The Plant Cell 29 (5), 944-959, 2017 | 221 | 2017 |
Dinoflagellate genome evolution JH Wisecaver, JD Hackett Annual review of microbiology 65 (1), 369-387, 2011 | 217 | 2011 |
Drivers of genetic diversity in secondary metabolic gene clusters within a fungal species AL Lind, JH Wisecaver, C Lameiras, P Wiemann, JM Palmer, NP Keller, ... PLoS biology 15 (11), e2003583, 2017 | 211 | 2017 |
The evolution of fungal metabolic pathways JH Wisecaver, JC Slot, A Rokas PLoS genetics 10 (12), e1004816, 2014 | 202 | 2014 |
Evolution of saxitoxin synthesis in cyanobacteria and dinoflagellates JD Hackett, JH Wisecaver, ML Brosnahan, DM Kulis, DM Anderson, ... Molecular biology and evolution 30 (1), 70-78, 2013 | 195 | 2013 |
Haplotype-phased genome and evolution of phytonutrient pathways of tetraploid blueberry M Colle, CP Leisner, CM Wai, S Ou, KA Bird, J Wang, JH Wisecaver, ... GigaScience 8 (3), giz012, 2019 | 183 | 2019 |
The birth, evolution and death of metabolic gene clusters in fungi A Rokas, JH Wisecaver, AL Lind Nature Reviews Microbiology 16 (12), 731-744, 2018 | 175 | 2018 |
Comparative genome sequencing reveals genomic signature of extreme desiccation tolerance in the anhydrobiotic midge O Gusev, Y Suetsugu, R Cornette, T Kawashima, MD Logacheva, ... Nature communications 5 (1), 4784, 2014 | 146 | 2014 |
The genome and structural proteome of an ocean siphovirus: a new window into the cyanobacterial ‘mobilome’ MB Sullivan, B Krastins, JL Hughes, L Kelly, M Chase, D Sarracino, ... Environmental microbiology 11 (11), 2935-2951, 2009 | 139 | 2009 |
Fungal metabolic gene clusters—caravans traveling across genomes and environments JH Wisecaver, A Rokas Frontiers in microbiology 6, 161, 2015 | 136 | 2015 |
Transcriptome analysis reveals nuclear-encoded proteins for the maintenance of temporary plastids in the dinoflagellate Dinophysis acuminata JH Wisecaver, JD Hackett BMC genomics 11, 1-10, 2010 | 118 | 2010 |
Horizontally acquired genes in early-diverging pathogenic fungi enable the use of host nucleosides and nucleotides WG Alexander, JH Wisecaver, A Rokas, CT Hittinger Proceedings of the National Academy of Sciences 113 (15), 4116-4121, 2016 | 85 | 2016 |
Examining the Evolution of the Regulatory Circuit Controlling Secondary Metabolism and Development in the Fungal Genus Aspergillus AL Lind, JH Wisecaver, TD Smith, X Feng, AM Calvo, A Rokas PLoS Genetics 11 (3), e1005096, 2015 | 83 | 2015 |
Evidence for loss and reacquisition of alcoholic fermentation in a fructophilic yeast lineage C Gonçalves, JH Wisecaver, J Kominek, MS Oom, MJ Leandro, XX Shen, ... Elife 7, e33034, 2018 | 74 | 2018 |
Bio-crude transcriptomics: gene discovery and metabolic network reconstruction for the biosynthesis of the terpenome of the hydrocarbon oil-producing green alga, Botryococcus … I Molnár, D Lopez, JH Wisecaver, TP Devarenne, TL Weiss, M Pellegrini, ... BMC genomics 13, 1-28, 2012 | 62 | 2012 |
Fungal isocyanide synthases and xanthocillin biosynthesis in Aspergillus fumigatus FY Lim, TH Won, N Raffa, JA Baccile, J Wisecaver, A Rokas, ... MBio 9 (3), 10.1128/mbio. 00785-18, 2018 | 57 | 2018 |
Horizontal gene transfer is a significant driver of gene innovation in dinoflagellates JH Wisecaver, ML Brosnahan, JD Hackett Genome Biology and Evolution 5 (12), 2368-2381, 2013 | 51 | 2013 |
Dynamic evolution of nitric oxide detoxifying flavohemoglobins, a family of single-protein metabolic modules in bacteria and eukaryotes JH Wisecaver, WG Alexander, SB King, C Todd Hittinger, A Rokas Molecular Biology and Evolution 33 (8), 1979-1987, 2016 | 49 | 2016 |