PHENIX: a comprehensive Python-based system for macromolecular structure solution PD Adams, PV Afonine, G Bunkóczi, VB Chen, IW Davis, N Echols, ... Acta Crystallographica Section D: Biological Crystallography 66 (2), 213-221, 2010 | 23482 | 2010 |
Towards automated crystallographic structure refinement with phenix. refine PV Afonine, RW Grosse-Kunstleve, N Echols, JJ Headd, NW Moriarty, ... Acta Crystallographica Section D: Biological Crystallography 68 (4), 352-367, 2012 | 5200 | 2012 |
Iterative model building, structure refinement and density modification with the PHENIX AutoBuild wizard TC Terwilliger, RW Grosse-Kunstleve, PV Afonine, NW Moriarty, PH Zwart, ... Acta Crystallographica Section D: Biological Crystallography 64 (1), 61-69, 2008 | 1610 | 2008 |
Decision-making in structure solution using Bayesian estimates of map quality: the PHENIX AutoSol wizard TC Terwilliger, PD Adams, RJ Read, AJ McCoy, NW Moriarty, ... Acta Crystallographica Section D: Biological Crystallography 65 (6), 582-601, 2009 | 920 | 2009 |
The Phenix software for automated determination of macromolecular structures PD Adams, PV Afonine, G Bunkóczi, VB Chen, N Echols, JJ Headd, ... Methods 55 (1), 94-106, 2011 | 850 | 2011 |
Automated structure solution with the PHENIX suite PH Zwart, PV Afonine, RW Grosse-Kunstleve, LW Hung, TR Ioerger, ... Structural proteomics: high-throughput methods, 419-435, 2008 | 579 | 2008 |
A new generation of crystallographic validation tools for the protein data bank RJ Read, PD Adams, WB Arendall, AT Brunger, P Emsley, RP Joosten, ... Structure 19 (10), 1395-1412, 2011 | 497 | 2011 |
Simultaneous femtosecond X-ray spectroscopy and diffraction of photosystem II at room temperature J Kern, R Alonso-Mori, R Tran, J Hattne, RJ Gildea, N Echols, C Glöckner, ... Science 340 (6131), 491-495, 2013 | 472 | 2013 |
Structure of photosystem II and substrate binding at room temperature ID Young, M Ibrahim, R Chatterjee, S Gul, FD Fuller, S Koroidov, ... Nature 540 (7633), 453-457, 2016 | 382 | 2016 |
De novo design of protein homo-oligomers with modular hydrogen-bond network–mediated specificity SE Boyken, Z Chen, B Groves, RA Langan, G Oberdorfer, A Ford, ... Science 352 (6286), 680-687, 2016 | 360 | 2016 |
Shapes and vorticities of superfluid helium nanodroplets LF Gomez, KR Ferguson, JP Cryan, C Bacellar, RMP Tanyag, C Jones, ... Science 345 (6199), 906-909, 2014 | 277 | 2014 |
Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy J Kern, R Tran, R Alonso-Mori, S Koroidov, N Echols, J Hattne, M Ibrahim, ... Nature communications 5 (1), 4371, 2014 | 241 | 2014 |
Xtriage and Fest: automatic assessment of X-ray data and substructure structure factor estimation PH Zwart, RW Grosse-Kunstleve, PD Adams CCP4 Newsl 43, 27-35, 2005 | 234* | 2005 |
Identification and structural analysis of a novel carboxysome shell protein with implications for metabolite transport MG Klein, P Zwart, SC Bagby, F Cai, SW Chisholm, S Heinhorst, ... Journal of molecular biology 392 (2), 319-333, 2009 | 225 | 2009 |
Nanoflow electrospinning serial femtosecond crystallography RG Sierra, H Laksmono, J Kern, R Tran, J Hattne, R Alonso-Mori, ... Acta Crystallographica Section D: Biological Crystallography 68 (11), 1584-1587, 2012 | 217 | 2012 |
Iterative-build OMIT maps: map improvement by iterative model building and refinement without model bias TC Terwilliger, RW Grosse-Kunstleve, PV Afonine, NW Moriarty, ... Acta Crystallographica Section D: Biological Crystallography 64 (5), 515-524, 2008 | 205 | 2008 |
Room temperature femtosecond X-ray diffraction of photosystem II microcrystals J Kern, R Alonso-Mori, J Hellmich, R Tran, J Hattne, H Laksmono, ... Proceedings of the National Academy of Sciences 109 (25), 9721-9726, 2012 | 193 | 2012 |
Structural determinants underlying photoprotection in the photoactive orange carotenoid protein of cyanobacteria A Wilson, JN Kinney, PH Zwart, C Punginelli, S d'Haene, F Perreau, ... Journal of Biological Chemistry 285 (24), 18364-18375, 2010 | 177 | 2010 |
Breaking good resolutions with ARP/wARP RJ Morris, PH Zwart, S Cohen, FJ Fernandez, M Kakaris, O Kirillova, ... Journal of synchrotron radiation 11 (1), 56-59, 2004 | 175 | 2004 |
Accurate macromolecular structures using minimal measurements from X-ray free-electron lasers J Hattne, N Echols, R Tran, J Kern, RJ Gildea, AS Brewster, ... Nature methods 11 (5), 545-548, 2014 | 170 | 2014 |