Homology modeling in drug discovery: Overview, current applications, and future perspectives MT Muhammed, E Aki‐Yalcin Chemical biology & drug design 93 (1), 12-20, 2019 | 350 | 2019 |
Pharmacophore Modeling in Drug Discovery: Methodology and Current Status MT Muhammed, E Aki-Yalcin Journal of the Turkish Chemical Society Section A: Chemistry 8 (3), 749-762, 2021 | 46 | 2021 |
Molecular Docking: Principles, Advances, and its Applications in Drug Discovery MT Muhammed, E Aki-Yalcin Letters in Drug Design & Discovery 21 (3), 480 - 495, 2024 | 38 | 2024 |
Drug design of new therapeutic agents: Molecular docking, molecular dynamics simulation, DFT and POM analyses of new Schiff base ligands and impact of substituents on … S Akkoc, H Karatas, MT Muhammed, Z Kökbudak, A Ceylan, F Almalki, ... Journal of Biomolecular Structure and Dynamics 41 (14), 6695-6708, 2023 | 23 | 2023 |
Synthesis, Antimicrobial Activity, and Molecular Modeling Studies of Some Benzoxazole Derivatives MT Muhammed, G Kuyucuklu, F Kaynak-Onurdag, E Aki-Yalcin Letters in Drug Design & Discovery, 2022 | 19 | 2022 |
Molecular modeling and in vitro antiproliferative activity studies of some imidazole and isoxazole derivatives MT Muhammed, ER Mustafa, S Akkoc Journal of Molecular Structure 1282, 135066, 2023 | 18 | 2023 |
Three dimensional structure prediction of panomycocin, a novel Exo-β-1, 3-glucanase isolated from Wickerhamomyces anomalus NCYC 434 and the computational site-directed … MT Muhammed, ÇD Son, F İzgü Computational Biology and Chemistry 80, 270-277, 2019 | 14 | 2019 |
In Vitro and in Silico Assessment of the Potential of Niaouli Essential Oil as a Quorum Sensing Inhibitor of Biofilm Formation and its Effects on Fibroblast Cell Viability E Onem, A Soyocak, MT Muhammed, A Ak Brazilian Archives of Biology and Technology 64, 2021 | 12 | 2021 |
1, 25 (OH) 2 D3 induced vitamin D receptor signaling negatively regulates endoplasmic reticulum-associated degradation (ERAD) and androgen receptor signaling in human prostate … Y Erzurumlu, E Aydogdu, HK Dogan, D Catakli, MT Muhammed, ... Cellular Signalling 103, 110577, 2023 | 11 | 2023 |
Computational insight into the mechanism of action of DNA gyrase inhibitors; revealing a new mechanism MT Muhammed, E Aki-Yalcin Current Computer-Aided Drug Design 20 (3), 224-235, 2024 | 10 | 2024 |
BTEAC catalyzed ultrasonic-assisted synthesis of bromobenzofuran-oxadiazoles: Unravelling anti-HepG-2 cancer therapeutic potential through in vitro and in silico studies A Irfan, AF Zahoor, A Rasul, SA Al-Hussain, S Faisal, S Ahmad, R Noor, ... International Journal of Molecular Sciences 24 (3), 3008, 2023 | 10 | 2023 |
Phytochemical profile, antimicrobial, and anti‐quorum sensing properties of fruit stalks of Prunus avium L. E Önem, HC Sarısu, AG Özaydın, MT Muhammed, A Ak Letters in Applied Microbiology 73 (4), 426-437, 2021 | 10 | 2021 |
Synthesis, DFT calculations, and molecular docking study of acetohydrazide‐based sulfonamide derivatives as paraoxonase 1 inhibitors G Arslan, B Gökçe, MT Muhammed, Ö Albayrak, T Önkol, AB Özçelik ChemistrySelect 8 (10), e202204630, 2023 | 8 | 2023 |
Persea americana Mill.: As a potent quorum sensing inhibitor of Pseudomonas aeruginosa PAO1 virulence FTG Dereli, E Önem, AG Özaydın, E Arın, MT Muhammed International Journal of Secondary Metabolite 9 (1), 14-26, 2022 | 8 | 2022 |
Density functional modeling, and molecular docking with SARS-CoV-2 spike protein (Wuhan) and omicron S protein (variant) studies of new heterocyclic compounds including a … S Akman, S Akkoc, CT Zeyrek, MT Muhammed, IO Ilhan Journal of Biomolecular Structure and Dynamics 41 (22), 12951-12965, 2023 | 7 | 2023 |
Cytotoxic activities of the pyrimidine-based acetamide and isophthalimide derivatives: an in vitro and in silico studies MT Muhammed, Z Kokbudak, S Akkoc Molecular Simulation 49 (10), 982-992, 2023 | 6 | 2023 |
Biochemical contents and antiquorum sensing, antiproliferative activities of Opuntia ficus-indica (L.) Mill. peel extract E Önem, G Kendir, S Akkoç, Y Erzurumlu, MT Muhammed, AG Özaydın South African Journal of Botany 150, 296-304, 2022 | 5 | 2022 |
Synthesis, structure characterization, DFT calculations, and computational anticancer activity investigations of 1-phenyl ethanol derivatives AM Senan, MT Muhammed, LA Al-Shuraym, SK Alhag, NAS Al-Areqi, ... Journal of Molecular Structure 1294, 136323, 2023 | 4 | 2023 |
Estrogens drive the endoplasmic reticulum-associated degradation and promote proto-oncogene c-Myc expression in prostate cancer cells by androgen receptor/estrogen receptor … Y Erzurumlu, HK Dogan, D Catakli, E Aydogdu, MT Muhammed Journal of Cell Communication and Signaling 17 (3), 793-811, 2023 | 4 | 2023 |
Synthesis of novel carboxamide-and carbohydrazide-benzimidazoles as selective butyrylcholinesterase inhibitors O Ozturk, FM Farouk, L Ooi, CSW Law, MT Muhammed, E Aki-Yalcin, ... Molecular Diversity 26 (5), 2863-2876, 2022 | 4 | 2022 |