Metagenomics, metatranscriptomics, and metabolomics approaches for microbiome analysis: supplementary issue: bioinformatics methods and applications for big metagenomics data V Aguiar-Pulido, W Huang, V Suarez-Ulloa, T Cickovski, K Mathee, ... Evolutionary Bioinformatics 12, EBO. S36436, 2016 | 359 | 2016 |
Secondary use and analysis of big data collected for patient care FJ Martin-Sanchez, V Aguiar-Pulido, GH Lopez-Campos, N Peek, ... Yearbook of medical informatics 26 (01), 28-37, 2017 | 57 | 2017 |
Random Forest classification based on star graph topological indices for antioxidant proteins E Fernández-Blanco, V Aguiar-Pulido, CR Munteanu, J Dorado Journal of theoretical biology 317, 331-337, 2013 | 55 | 2013 |
Star graphs of protein sequences and proteome mass spectra in cancer prediction JM Vázquez, V Aguiar, JA Seoane, A Freire, JA Serantes, J Dorado, ... Current Proteomics 6 (4), 275-288, 2009 | 43 | 2009 |
Threshold for neural tube defect risk by accumulated singleton loss-of-function variants Z Chen, Y Lei, Y Zheng, V Aguiar-Pulido, ME Ross, R Peng, L Jin, ... Cell research 28 (10), 1039-1041, 2018 | 40 | 2018 |
Naïve Bayes QSDR classification based on spiral-graph Shannon entropies for protein biomarkers in human colon cancer V Aguiar-Pulido, CR Munteanu, JA Seoane, E Fernandez-Blanco, ... Molecular BioSystems 8 (6), 1716-1722, 2012 | 33 | 2012 |
Evolutionary computation and QSAR research V Aguiar-Pulido, M Gestal, M Cruz-Monteagudo, JR Rabuñal, J Dorado, ... Current computer-aided drug design 9 (2), 206-225, 2013 | 29 | 2013 |
Machine learning techniques for single nucleotide polymorphism—disease classification models in schizophrenia V Aguiar-Pulido, JA Seoane, JR Rabuñal, J Dorado, A Pazos, ... Molecules 15 (7), 4875-4889, 2010 | 28 | 2010 |
Genome-wide bioinformatic analyses predict key host and viral factors in SARS-CoV-2 pathogenesis MG Ferrarini, A Lal, R Rebollo, AJ Gruber, A Guarracino, IM Gonzalez, ... Communications biology 4 (1), 590, 2021 | 26 | 2021 |
The CHROMEVALOA database: a resource for the evaluation of Okadaic Acid contamination in the marine environment based on the chromatin-associated transcriptome of the mussel … V Suárez-Ulloa, J Fernández-Tajes, V Aguiar-Pulido, C Rivera-Casas, ... Marine Drugs 11 (3), 830-841, 2013 | 24 | 2013 |
Unbiased high-throughput characterization of mussel transcriptomic responses to sublethal concentrations of the biotoxin okadaic acid V Suarez-Ulloa, J Fernandez-Tajes, V Aguiar-Pulido, MV Prego-Faraldo, ... PeerJ 3, e1429, 2015 | 20 | 2015 |
Exploring patterns of epigenetic information with data mining techniques V Aguiar-Pulido, J A Seoane, M Gestal, J Dorado Current pharmaceutical design 19 (4), 779-789, 2013 | 20 | 2013 |
ATria: a novel centrality algorithm applied to biological networks T Cickovski, E Peake, V Aguiar-Pulido, G Narasimhan BMC bioinformatics 18, 1-10, 2017 | 14 | 2017 |
Biomedical data integration in computational drug design and bioinformatics J A Seoane, V Aguiar-Pulido, C R Munteanu, D Rivero, J R Rabunal, ... Current computer-aided drug design 9 (1), 108-117, 2013 | 14 | 2013 |
Using genetic algorithms for automatic recurrent ANN development: an application to EEG signal classification D Rivero, V Aguiar-Pulido, E Fernandez-Blanco, M Gestal International Journal of Data Mining, Modelling and Management 5 (2), 182-191, 2013 | 11 | 2013 |
Loss of RAD9B impairs early neural development and contributes to the risk for human spina bifida X Cao, T Tian, JW Steele, RM Cabrera, V Aguiar‐Pulido, S Wadhwa, ... Human mutation 41 (4), 786-799, 2020 | 10 | 2020 |
Single-cell sperm transcriptomes and variants from fathers of children with and without autism spectrum disorder D Tomoiaga, V Aguiar-Pulido, S Shrestha, P Feinstein, SE Levy, ... NPJ genomic medicine 5 (1), 14, 2020 | 10 | 2020 |
Gene expression patterns in transgenic mouse models of hypertrophic cardiomyopathy caused by mutations in myosin regulatory light chain W Huang, K Kazmierczak, Z Zhou, V Aguiar-Pulido, G Narasimhan, ... Archives of biochemistry and biophysics 601, 121-132, 2016 | 9 | 2016 |
GA-based data mining applied to genetic data for the diagnosis of complex diseases V Aguiar, JA Seoane, A Freire, L Guo Soft Computing Methods for Practical Environment Solutions: Techniques and …, 2010 | 9 | 2010 |
Personalized epigenetics T Tollefsbol Academic Press, 2015 | 8 | 2015 |