The yak genome and adaptation to life at high altitude Q Qiu, G Zhang, T Ma, W Qian, J Wang, Z Ye, C Cao, Q Hu, J Kim, ... Nature genetics 44 (8), 946-949, 2012 | 885 | 2012 |
Antibiotic treatment enhances the genome-wide mutation rate of target cells H Long, SF Miller, C Strauss, C Zhao, L Cheng, Z Ye, K Griffin, R Te, ... Proceedings of the National Academy of Sciences 113 (18), E2498-E2505, 2016 | 208 | 2016 |
A New Reference Genome Assembly for the Microcrustacean Daphnia pulex Z Ye, S Xu, K Spitze, J Asselman, X Jiang, MS Ackerman, J Lopez, ... G3: Genes, Genomes, Genetics 7 (5), 1405-1416, 2017 | 107 | 2017 |
Phylogenomic reconstruction of lactic acid bacteria: an update ZG Zhang, ZQ Ye, L Yu, P Shi BMC Evolutionary Biology 11, 1-12, 2011 | 92 | 2011 |
Hybridization and the Origin of Contagious Asexuality in Daphnia pulex S Xu, K Spitze, MS Ackerman, Z Ye, L Bright, N Keith, CE Jackson, ... Molecular biology and evolution 32 (12), 3215-3225, 2015 | 66 | 2015 |
Population Genomics of Daphnia pulex M Lynch, R Gutenkunst, M Ackerman, K Spitze, Z Ye, T Maruki, Z Jia Genetics 206 (1), 315-332, 2017 | 63 | 2017 |
Genetic control of male production in Daphnia pulex Z Ye, C Molinier, C Zhao, CR Haag, M Lynch Proceedings of the National Academy of Sciences 116 (31), 15602-15609, 2019 | 29 | 2019 |
The rapid, mass invasion of New Zealand by North American Daphnia “pulex” Z Ye, E Williams, C Zhao, CW Burns, M Lynch Limnology and Oceanography 66 (7), 2672-2683, 2021 | 23 | 2021 |
Insertion Polymorphisms of Mobile Genetic Elements in Sexual and Asexual Populations of Daphnia pulex X Jiang, H Tang, Z Ye, M Lynch Genome biology and evolution 9 (2), 362-374, 2017 | 17 | 2017 |
Evolutionary genomics of a subdivided species T Maruki, Z Ye, M Lynch Molecular biology and evolution 39 (8), msac152, 2022 | 12 | 2022 |
Genetic Diversity, Heteroplasmy, and Recombination in Mitochondrial Genomes of Daphnia pulex, Daphnia pulicaria, and Daphnia obtusa Z Ye, C Zhao, RT Raborn, M Lin, W Wei, Y Hao, M Lynch Molecular biology and evolution 39 (4), msac059, 2022 | 11 | 2022 |
Chromosomal rearrangements preserve adaptive divergence in ecological speciation CE Jackson, S Xu, Z Ye, ME Pfrender, M Lynch, JK Colbourne, JR Shaw BioRxiv, 2021.08. 20.457158, 2021 | 11 | 2021 |
Genome-Wide Allele-Specific Expression in Obligately Asexual Daphnia pulex and the Implications for the Genetic Basis of Asexuality Z Ye, X Jiang, ME Pfrender, M Lynch Genome biology and evolution 13 (11), evab243, 2021 | 10 | 2021 |
Evolution of sex determination in crustaceans Z Ye, T Bishop, Y Wang, R Shahriari, M Lynch Marine Life Science & Technology 5 (1), 1-11, 2023 | 8 | 2023 |
The Linkage-Disequilibrium and Recombinational Landscape in Daphnia pulex M Lynch, Z Ye, L Urban, T Maruki, W Wei Genome biology and evolution 14 (11), evac145, 2022 | 7 | 2022 |
The genome-wide signature of short-term temporal selection M Lynch, W Wei, Z Ye, M Pfrender Proceedings of the National Academy of Sciences 121 (28), e2307107121, 2024 | 4 | 2024 |
Evolutionary insights from a large-scale survey of population-genomic variation Z Ye, W Wei, ME Pfrender, M Lynch Molecular biology and evolution 40 (11), msad233, 2023 | 3 | 2023 |
Evolutionary Genomics of Sister Species Differing in Effective Population Sizes and Recombination Rates Z Ye, ME Pfrender, M Lynch Genome biology and evolution 15 (11), evad202, 2023 | 2 | 2023 |
Mitogenomic architecture and evolution of the soil ciliates Colpoda Y Zhang, H Li, Y Wang, M Nie, K Zhang, J Pan, Y Zhang, Z Ye, RA Zufall, ... Msystems 9 (2), e01161-23, 2024 | 1 | 2024 |
Integrative analyses on the ciliates Colpoda illuminate the life history evolution of soil microorganisms H Li, K Wu, Y Feng, C Gao, Y Wang, Y Zhang, J Pan, X Shen, RA Zufall, ... Msystems, e01379-23, 2024 | | 2024 |