| Disentangling metabolic functions of bacteria in the honey bee gut L Kešnerová, RAT Mars, KM Ellegaard, M Troilo, U Sauer, P Engel PLoS biology 15 (12), e2003467, 2017 | 355 | 2017 |
| Genomic diversity landscape of the honey bee gut microbiota KM Ellegaard, P Engel Nature communications 10 (1), 446, 2019 | 200 | 2019 |
| Comparative Genomics of Wolbachia and the Bacterial Species Concept KM Ellegaard, L Klasson, K Näslund, K Bourtzis, SGE Andersson PLoS genetics 9 (4), e1003381, 2013 | 178 | 2013 |
| Extensive intra-phylotype diversity in lactobacilli and bifidobacteria from the honeybee gut KM Ellegaard, D Tamarit, E Javelind, TC Olofsson, SGE Andersson, ... BMC genomics 16, 1-22, 2015 | 157 | 2015 |
| Beyond 16S rRNA community profiling: intra-species diversity in the gut microbiota KM Ellegaard, P Engel Frontiers in microbiology 7, 1475, 2016 | 120 | 2016 |
| Molecular epidemiology of the SARS-CoV-2 variant Omicron BA. 2 sub-lineage in Denmark, 29 November 2021 to 2 January 2022 J Fonager, M Bennedbæk, P Bager, J Wohlfahrt, KM Ellegaard, ... Eurosurveillance 27 (10), 2200181, 2022 | 93 | 2022 |
| Vast differences in strain-level diversity in the gut microbiota of two closely related honey bee species KM Ellegaard, S Suenami, R Miyazaki, P Engel Current biology 30 (13), 2520-2531. e7, 2020 | 70 | 2020 |
| Occurrence and significance of Omicron BA. 1 infection followed by BA. 2 reinfection M Stegger, SM Edslev, RN Sieber, A Cäcilia Ingham, KL Ng, MHE Tang, ... MedRxiv, 2022.02. 19.22271112, 2022 | 67 | 2022 |
| Functionally Structured Genomes in Lactobacillus kunkeei Colonizing the Honey Crop and Food Products of Honeybees and Stingless Bees D Tamarit, KM Ellegaard, J Wikander, T Olofsson, A Vasquez, ... Genome Biology and Evolution 7 (6), 1455-1473, 2015 | 59 | 2015 |
| Genomic changes underlying host specialization in the bee gut symbiont Lactobacillus Firm5 KM Ellegaard, S Brochet, G Bonilla‐Rosso, O Emery, N Glover, N Hadadi, ... Molecular ecology 28 (9), 2224-2237, 2019 | 58 | 2019 |
| Rapid diversification by recombination in Bartonella grahamii from wild rodents in Asia contrasts with low levels of genomic divergence in Northern Europe and … EC Berglund, K Ellegaard, F Granberg, Z Xie, S Maruyama, MY Kosoy, ... Molecular Ecology 19 (11), 2241-2255, 2010 | 46 | 2010 |
| First cases of SARS-CoV-2 BA. 2.86 in Denmark, 2023 M Rasmussen, FT Møller, V Gunalan, S Baig, M Bennedbæk, ... Eurosurveillance 28 (36), 2300460, 2023 | 42 | 2023 |
| Effect of vaccination on household transmission of SARS-CoV-2 Delta variant of concern FP Lyngse, K Mølbak, M Denwood, LE Christiansen, CH Møller, ... Nature Communications 13 (1), 3764, 2022 | 31 | 2022 |
| Synergies between division of labor and gut microbiomes of social insects VM Sinotte, J Renelies-Hamilton, BA Taylor, KM Ellegaard, P Sapountzis, ... Frontiers in Ecology and Evolution 7, 503, 2020 | 30 | 2020 |
| Testing the reproducibility of multiple displacement amplification on genomes of clonal endosymbiont populations KM Ellegaard, L Klasson, SGE Andersson PloS one 8 (11), e82319, 2013 | 29 | 2013 |
| Virus isolation and neutralisation of SARS-CoV-2 variants BA. 2.86 and EG. 5.1 R Lassaunière, C Polacek, M Utko, KM Sørensen, S Baig, K Ellegaard, ... The Lancet Infectious Diseases 23 (12), e509-e510, 2023 | 26 | 2023 |
| Genomic diversity landscape of the honey bee gut microbiota. Nat Commun 10: 446 KM Ellegaard, P Engel | 24 | 2019 |
| Candidate innate immune system gene expression in the ecological model Daphnia E Decaestecker, P Labbé, K Ellegaard, JE Allen, TJ Little Developmental & Comparative Immunology 35 (10), 1068-1077, 2011 | 24 | 2011 |
| New reference genome sequences for 17 bacterial strains of the honey bee gut microbiota KM Ellegaard, P Engel Microbiology Resource Announcements 7 (3), 10.1128/mra. 00834-18, 2018 | 17 | 2018 |
| Acetobacteraceae in the honey bee gut comprise two distant clades with diverging metabolism and ecological niches G Bonilla-Rosso, C Paredes Juan, S Das, KM Ellegaard, O Emery, ... BioRxiv, 861260, 2019 | 15 | 2019 |
