| cMolGPT: A conditional generative pre-trained transformer for target-specific de novo molecular generation Y Wang, H Zhao, S Sciabola, W Wang Molecules 28 (11), 4430, 2023 | 29* | 2023 |
| Prospective validation of machine learning algorithms for absorption, distribution, metabolism, and excretion prediction: An industrial perspective C Fang, Y Wang, R Grater, S Kapadnis, C Black, P Trapa, S Sciabola Journal of Chemical Information and Modeling 63 (11), 3263-3274, 2023 | 23 | 2023 |
| A novel deep learning method for predictive modeling of microbiome data Y Wang, T Bhattacharya, Y Jiang, X Qin, Y Wang, Y Liu, AJ Saykin, ... Briefings in bioinformatics 22 (3), bbaa073, 2020 | 23 | 2020 |
| Exploiting deep transfer learning for the prediction of functional noncoding variants using genomic sequence L Chen, Y Wang Bioinformatics, Oxford University Press, 2022 | 13 | 2022 |
| TIVAN: tissue-specific cis-eQTL single nucleotide variant annotation and prediction L Chen, Y Wang, B Yao, A Mitra, X Wang, X Qin Bioinformatics 35 (9), 1573-1575, 2019 | 12 | 2019 |
| Performance modeling for I/O‐intensive applications on virtual machines T Bhattacharya, X Peng, J Mao, C Zhang, T Takreeti, Y Wang, T Cao, ... Concurrency and Computation: Practice and Experience 34 (10), e6823, 2022 | 8 | 2022 |
| DeepPerVar: a multi-modal deep learning framework for functional interpretation of genetic variants in personal genome Y Wang, L Chen Bioinformatics 38 (24), 5340-5351, 2022 | 6 | 2022 |
| WEVar: a novel statistical learning framework for predicting noncoding regulatory variants Y Wang, Y Jiang, B Yao, K Huang, Y Liu, Y Wang, X Qin, AJ Saykin, ... Briefings in Bioinformatics, bbab189, 2021 | 6 | 2021 |
| Large-Scale Pretraining Improves Sample Efficiency of Active Learning-Based Virtual Screening Z Cao, S Sciabola, Y Wang Journal of Chemical Information and Modeling 64 (6), 1882-1891, 2024 | 2* | 2024 |
| ROSHAMBO: Open-Source Molecular Alignment and 3D Similarity Scoring R Atwi, Y Wang, S Sciabola, A Antoszewski | | 2024 |
| Machine Learning Methods as a Cost-Effective Alternative to Physics-Based Binding Free Energy Calculations N Bansal, Y Wang, S Sciabola Molecules 29 (4), 830, 2024 | | 2024 |
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