TIMER: a web server for comprehensive analysis of tumor-infiltrating immune cells T Li, J Fan, B Wang, N Traugh, Q Chen, JS Liu, B Li, XS Liu Cancer research 77 (21), e108-e110, 2017 | 4851 | 2017 |
TISCH: a comprehensive web resource enabling interactive single-cell transcriptome visualization of tumor microenvironment D Sun, J Wang, Y Han, X Dong, J Ge, R Zheng, X Shi, B Wang, Z Li, ... Nucleic acids research 49 (D1), D1420-D1430, 2021 | 713 | 2021 |
Integrative analysis of pooled CRISPR genetic screens using MAGeCKFlute B Wang, M Wang, W Zhang, T Xiao, CH Chen, A Wu, F Wu, N Traugh, ... Nature protocols 14 (3), 756-780, 2019 | 330 | 2019 |
Landscape of tumor-infiltrating T cell repertoire of human cancers B Li, T Li, JC Pignon, B Wang, J Wang, SA Shukla, R Dou, Q Chen, ... Nature genetics 48 (7), 725-732, 2016 | 318 | 2016 |
Synthetic lethal and resistance interactions with BET bromodomain inhibitors in triple-negative breast cancer S Shu, HJ Wu, YG Jennifer, R Zeid, IS Harris, B Jovanović, K Murphy, ... Molecular cell 78 (6), 1096-1113. e8, 2020 | 151 | 2020 |
Landscape of B cell immunity and related immune evasion in human cancers X Hu, J Zhang, J Wang, J Fu, T Li, X Zheng, B Wang, S Gu, P Jiang, J Fan, ... Nature genetics 51 (3), 560-567, 2019 | 143 | 2019 |
Cistrome cancer: a web resource for integrative gene regulation modeling in cancer S Mei, CA Meyer, R Zheng, Q Qin, Q Wu, P Jiang, B Li, X Shi, B Wang, ... Cancer research 77 (21), e19-e22, 2017 | 127 | 2017 |
In vivo CRISPR screens identify the E3 ligase Cop1 as a modulator of macrophage infiltration and cancer immunotherapy target X Wang, C Tokheim, SS Gu, B Wang, Q Tang, Y Li, N Traugh, Z Zeng, ... Cell 184 (21), 5357-5374. e22, 2021 | 121 | 2021 |
Ultrasensitive detection of TCR hypervariable-region sequences in solid-tissue RNA–seq data B Li, T Li, B Wang, R Dou, J Zhang, JS Liu, XS Liu Nature genetics 49 (4), 482-483, 2017 | 80 | 2017 |
Systematic characterization of mutations altering protein degradation in human cancers C Tokheim, X Wang, RT Timms, B Zhang, EL Mena, B Wang, C Chen, ... Molecular cell 81 (6), 1292-1308. e11, 2021 | 52 | 2021 |
Immune receptor repertoires in pediatric and adult acute myeloid leukemia J Zhang, X Hu, J Wang, AD Sahu, D Cohen, L Song, Z Ouyang, J Fan, ... Genome medicine 11, 1-11, 2019 | 47 | 2019 |
CRISPR screens identify essential cell growth mediators in BRAF inhibitor-resistant melanoma Z Li, B Wang, S Gu, P Jiang, A Sahu, CH Chen, T Han, S Shi, X Wang, ... Genomics, Proteomics and Bioinformatics 18 (1), 26-40, 2020 | 19 | 2020 |
A web server for comprehensive analysis of tumor-infiltrating immune cells., 2017, 77, pp. e108-e110 T Li, J Fan, B Wang, N Traugh, Q Chen, JS Liu, B Li, XSL Timer DOI: https://doi. org/10.1158/0008-5472. CAN-17-0307. PMID: https://www …, 0 | 19 | |
Mesoscale DNA feature in antibody-coding sequence facilitates somatic hypermutation Y Wang, S Zhang, X Yang, JK Hwang, C Zhan, C Lian, C Wang, T Gui, ... Cell 186 (10), 2193-2207. e19, 2023 | 17 | 2023 |
C-to-G editing generates double-strand breaks causing deletion, transversion, and translocation Nature Cell Biology, 2024 | 15 | 2024 |
DNA repair mechanisms that promote insertion-deletion events during immunoglobulin gene diversification Q Hao, C Zhan, C Lian, S Luo, W Cao, B Wang, X Xie, X Ye, T Gui, ... Science immunology 8 (81), eade1167, 2023 | 11 | 2023 |
Deactivation of ligand-receptor interactions enhancing lymphocyte infiltration drives melanoma resistance to Immune Checkpoint Blockade S Sahni, B Wang, D Wu, SR Dhruba, M Nagy, S Patkar, I Ferreira, K Wang, ... bioRxiv, 2023 | 1 | 2023 |
A machine learning model reveals expansive downregulation of ligand-receptor interactions that enhance lymphocyte infiltration in melanoma with developed resistance to immune … S Sahni, B Wang, D Wu, SR Dhruba, M Nagy, S Patkar, I Ferreira, CP Day, ... Nature Communications 15 (1), 8867, 2024 | | 2024 |
Decoupling the correlation between cytotoxic and exhausted T lymphocyte transcriptomic signatures enhances melanoma immunotherapy response prediction from tumor expression B Wang, K Wang, P Jiang, E Ruppin bioRxiv, 2023 | | 2023 |
Abstract P108: In vivo CRISPR screens identify E3 ligase COP1 as a modulator of macrophage infiltration and cancer immunotherapy target X Wang, C Tokheim, SS Gu, B Wang, Q Tang, Y Li, N Traugh, Z Zeng, ... Molecular Cancer Therapeutics 20 (12_Supplement), P108-P108, 2021 | | 2021 |