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Daniel W. Kneller
Daniel W. Kneller
New England Biolabs
在 ornl.gov 的电子邮件经过验证 - 首页
标题
引用次数
引用次数
年份
Structural Plasticity of the SARS-CoV-2 3CL Mpro Active Site Cavity Revealed by Room Temperature X-ray Crystallography
DW Kneller, G Phillips, HM O'Neill, R Jedrzejczak, L Stols, P Langan, ...
Nature Communications, 2020
4022020
Supercomputer-based ensemble docking drug discovery pipeline with application to COVID-19
A Acharya, R Agarwal, MB Baker, J Baudry, D Bhowmik, S Boehm, ...
Journal of chemical information and modeling 60 (12), 5832-5852, 2020
1692020
Malleability of the SARS-CoV-2 3CL Mpro active-site cavity facilitates binding of clinical antivirals
DW Kneller, S Galanie, G Phillips, HM O'Neill, L Coates, A Kovalevsky
Structure 28 (12), 1313-1320. e3, 2020
1292020
Unusual zwitterionic catalytic site of SARS–CoV-2 main protease revealed by neutron crystallography
DW Kneller, G Phillips, KL Weiss, S Pant, Q Zhang, HM O'Neill, L Coates, ...
Journal of Biological Chemistry 295 (50), 17365-17373, 2020
1142020
High-throughput virtual screening and validation of a SARS-CoV-2 main protease noncovalent inhibitor
A Clyde, S Galanie, DW Kneller, H Ma, Y Babuji, B Blaiszik, A Brace, ...
Journal of chemical information and modeling 62 (1), 116-128, 2021
1012021
Covalent narlaprevir-and boceprevir-derived hybrid inhibitors of SARS-CoV-2 main protease
DW Kneller, H Li, G Phillips, KL Weiss, Q Zhang, MA Arnould, CB Jonsson, ...
Nature communications 13 (1), 1-11, 2022
902022
Highly resistant HIV-1 proteases and strategies for their inhibition
IT Weber, DW Kneller, A Wong-Sam
Future medicinal chemistry 7 (8), 1023-1038, 2015
792015
Inhibitor binding influences the protonation states of histidines in SARS-CoV-2 main protease
A Pavlova, DL Lynch, I Daidone, L Zanetti-Polzi, MD Smith, C Chipot, ...
Chemical science 12 (4), 1513-1527, 2021
602021
Room-temperature X-ray crystallography reveals the oxidation and reactivity of cysteine residues in SARS-CoV-2 3CL Mpro: insights into enzyme mechanism and drug design
DW Kneller, G Phillips, HM O'Neill, K Tan, A Joachimiak, L Coates, ...
IUCrJ 7 (6), 1028-1035, 2020
572020
Direct observation of protonation state modulation in SARS-CoV-2 main protease upon inhibitor binding with neutron crystallography
DW Kneller, G Phillips, KL Weiss, Q Zhang, L Coates, A Kovalevsky
Journal of medicinal chemistry 64 (8), 4991-5000, 2021
472021
Structural, electronic, and electrostatic determinants for inhibitor binding to subsites S1 and S2 in SARS-CoV-2 main protease
DW Kneller, H Li, S Galanie, G Phillips, A Labbé, KL Weiss, Q Zhang, ...
Journal of medicinal chemistry 64 (23), 17366-17383, 2021
442021
The mechanisms of catalysis and ligand binding for the SARS-CoV-2 NSP3 macrodomain from neutron and x-ray diffraction at room temperature
GJ Correy, DW Kneller, G Phillips, S Pant, S Russi, AE Cohen, G Meigs, ...
Science advances 8 (21), eabo5083, 2022
312022
Potent HIV‐1 Protease Inhibitors Containing Carboxylic and Boronic Acids: Effect on Enzyme Inhibition and Antiviral Activity and Protein‐Ligand X‐ray Structural Studies
AK Ghosh, Z Xia, S Kovela, WL Robinson, ME Johnson, DW Kneller, ...
ChemMedChem 14 (21), 1863-1872, 2019
292019
Michaelis-like complex of SARS-CoV-2 main protease visualized by room-temperature X-ray crystallography
DW Kneller, Q Zhang, L Coates, JM Louis, A Kovalevsky
IUCrJ 8 (6), 973-979, 2021
252021
Hit expansion of a noncovalent SARS-CoV-2 main protease inhibitor
J Glaser, A Sedova, S Galanie, DW Kneller, RB Davidson, E Maradzike, ...
ACS Pharmacology & Translational Science 5 (4), 255-265, 2022
222022
Room-temperature neutron and X-ray data collection of 3CL Mpro from SARS-CoV-2
DW Kneller, G Phillips, A Kovalevsky, L Coates
Acta Crystallographica Section F: Structural Biology Communications 76 (10 …, 2020
212020
Highly drug-resistant HIV-1 protease mutant PRS17 shows enhanced binding to substrate analogues
J Agniswamy, DW Kneller, R Brothers, YF Wang, RW Harrison, IT Weber
ACS omega 4 (5), 8707-8719, 2019
192019
Structural and functional characterization of NEMO cleavage by SARS-CoV-2 3CLpro
MA Hameedi, E T. Prates, MR Garvin, II Mathews, BK Amos, ...
Nature Communications 13 (1), 5285, 2022
172022
Autoprocessing and oxyanion loop reorganization upon GC373 and nirmatrelvir binding of monomeric SARS-CoV-2 main protease catalytic domain
NT Nashed, DW Kneller, L Coates, R Ghirlando, A Aniana, A Kovalevsky, ...
Communications Biology 5 (1), 976, 2022
152022
Potent antiviral HIV-1 protease inhibitor combats highly drug resistant mutant PR20
DW Kneller, J Agniswamy, AK Ghosh, IT Weber
Biochemical and biophysical research communications 519 (1), 61-66, 2019
152019
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