| A multi-scale map of cell structure fusing protein images and interactions Y Qin, EL Huttlin, CF Winsnes, ML Gosztyla, L Wacheul, MR Kelly, ... Nature 600 (7889), 536-542, 2021 | 56 | 2021 |
| Ccdc11 is a novel centriolar satellite protein essential for ciliogenesis and establishment of left–right asymmetry E Silva, E Betleja, E John, P Spear, JJ Moresco, S Zhang, JR Yates III, ... Molecular biology of the cell 27 (1), 48-63, 2016 | 48 | 2016 |
| Interpretation of cancer mutations using a multiscale map of protein systems F Zheng, MR Kelly, DJ Ramms, ML Heintschel, K Tao, B Tutuncuoglu, ... Science 374 (6563), eabf3067, 2021 | 40 | 2021 |
| Transcriptional responses to DNA damage E Silva, T Ideker DNA repair 79, 40-49, 2019 | 27 | 2019 |
| Genistein Protects Hematopoietic Stem Cells against G-CSF–Induced DNA DamageGenistein Limits DNA Damage LR Souza, E Silva, E Calloway, O Kucuk, M Rossi, ML McLemore Cancer Prevention Research 7 (5), 534-544, 2014 | 15 | 2014 |
| Strategies for network GWAS evaluated using classroom crowd science SH Fong, DE Carlin, K Ozturk, N Arang, B Bao, H Bennett, X Cai, K Chau, ... Cell systems 8 (4), 275-280, 2019 | 6 | 2019 |
| A deep learning model of tumor cell architecture elucidates response and resistance to CDK4/6 inhibitors S Park, E Silva, A Singhal, MR Kelly, K Licon, I Panagiotou, C Fogg, ... Nature Cancer, 1-14, 2024 | 2 | 2024 |
| Genome-wide dynamic evaluation of the UV-induced DNA damage response E Silva, M Michaca, B Munson, GJ Bean, PA Jaeger, K Licon, EA Winzeler, ... G3: Genes, Genomes, Genetics 10 (9), 2981-2988, 2020 | 1 | 2020 |
| Understanding CDK4/6 inhibitor response via a data-driven map of cancer protein assemblies and visible machine learning S Park, E Silva, A Singhal, S Fong, J Lee, K Licon, B Parker, K Yeung, ... 2023 Joint Mathematics Meetings (JMM 2023), 2023 | | 2023 |
| Predicting clinical drug responses using a few-shot learning-based interpretable AI S Park, A Singhal, E Silva, JF Kreisberg, T Ideker Cancer Research 82 (12_Supplement), 1159-1159, 2022 | | 2022 |
| Prediction of therapeutic response via data-driven maps of tumor cell architecture EN Silva, A Singhal, S Park, J Kreisberg, T Ideker Cancer Research 82 (12_Supplement), 636-636, 2022 | | 2022 |
| Mutations in iron-sulfur cluster proteins are associated with decreased bladder cancer cell senescence and improved survival outcomes D Patel, F Zheng, M Chen, J Kreisberg, E Silva, T Ideker, K Licon Cancer Research 81 (13_Supplement), 217-217, 2021 | | 2021 |
| A multiscale map of recurrently mutated systems in cancer. F Zheng, K Ono, E Silva, D Swaney, M Kim, J Shangguan, D Pratt, X Nan, ... CANCER RESEARCH 80 (11), 30-30, 2020 | | 2020 |
| Abstract PR14: A multiscale map of recurrently mutated systems in cancer F Zheng, K Ono, E Silva, D Swaney, M Kim, J Shangguan, D Pratt, X Nan, ... Cancer Research 80 (11_Supplement), PR14-PR14, 2020 | | 2020 |
| Genome-Wide Dynamic Evaluation of the UV-Induced DNA Damage Response. MH Michaca, EN Silva, T Ideker, E Winzeler, S Ottilie, P Jaegar, G Bean MOLECULAR BIOLOGY OF THE CELL 29 (26), 2018 | | 2018 |
| Ccdc11 is a novel centriolar satellite protein required for establishment of left-right asymmetry EN Silva, MR Mahjoub MOLECULAR BIOLOGY OF THE CELL 24, 2013 | | 2013 |
