Proteogenomic characterization reveals therapeutic vulnerabilities in lung adenocarcinoma MA Gillette, S Satpathy, S Cao, SM Dhanasekaran, SV Vasaikar, K Krug, ... Cell 182 (1), 200-225. e35, 2020 | 483 | 2020 |
Integrated proteogenomic characterization of clear cell renal cell carcinoma DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song, Y Hu, ... Cell 179 (4), 964-983. e31, 2019 | 470 | 2019 |
Reproducible workflow for multiplexed deep-scale proteome and phosphoproteome analysis of tumor tissues by liquid chromatography–mass spectrometry P Mertins, LC Tang, K Krug, DJ Clark, MA Gritsenko, L Chen, KR Clauser, ... Nature protocols 13 (7), 1632-1661, 2018 | 406 | 2018 |
Proteogenomic characterization of endometrial carcinoma Y Dou, EA Kawaler, DC Zhou, MA Gritsenko, C Huang, L Blumenberg, ... Cell 180 (4), 729-748. e26, 2020 | 342 | 2020 |
Proteogenomic characterization of pancreatic ductal adenocarcinoma L Cao, C Huang, DC Zhou, Y Hu, TM Lih, SR Savage, K Krug, DJ Clark, ... Cell 184 (19), 5031-5052. e26, 2021 | 291 | 2021 |
Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma C Huang, L Chen, SR Savage, RV Eguez, Y Dou, Y Li, ... Cancer cell 39 (3), 361-379. e16, 2021 | 231 | 2021 |
Mapping the O‐glycoproteome using site‐specific extraction of O‐linked glycopeptides (EXoO) W Yang, M Ao, Y Hu, QK Li, H Zhang Molecular systems biology 14 (11), e8486, 2018 | 127 | 2018 |
Comparison of enrichment methods for intact N-and O-linked glycopeptides using strong anion exchange and hydrophilic interaction liquid chromatography W Yang, P Shah, Y Hu, S Toghi Eshghi, S Sun, Y Liu, H Zhang Analytical chemistry 89 (21), 11193-11197, 2017 | 103 | 2017 |
Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis R Kawahara, A Chernykh, K Alagesan, M Bern, W Cao, RJ Chalkley, ... Nature methods 18 (11), 1304-1316, 2021 | 102 | 2021 |
Integrated proteomic and glycoproteomic characterization of human high-grade serous ovarian carcinoma Y Hu, J Pan, P Shah, M Ao, SN Thomas, Y Liu, L Chen, M Schnaubelt, ... Cell reports 33 (3), 2020 | 101 | 2020 |
Label-Free Quantitative Proteomics Analysis of Antibiotic Response in Staphylococcus aureus to Oxacillin X Liu, Y Hu, PJ Pai, D Chen, H Lam Journal of proteome research 13 (3), 1223-1233, 2014 | 82 | 2014 |
Glycoproteomics-based signatures for tumor subtyping and clinical outcome prediction of high-grade serous ovarian cancer J Pan, Y Hu, S Sun, L Chen, M Schnaubelt, D Clark, M Ao, Z Zhang, ... Nature communications 11 (1), 6139, 2020 | 78 | 2020 |
Site-specific fucosylation analysis identifying glycoproteins associated with aggressive prostate cancer cell lines using tandem affinity enrichments of intact glycopeptides … J Zhou, W Yang, Y Hu, N Hoti, Y Liu, P Shah, S Sun, D Clark, S Thomas, ... Analytical chemistry 89 (14), 7623-7630, 2017 | 74 | 2017 |
N-GlycositeAtlas: a database resource for mass spectrometry-based human N-linked glycoprotein and glycosylation site mapping S Sun, Y Hu, M Ao, P Shah, J Chen, W Yang, X Jia, Y Tian, S Thomas, ... Clinical proteomics 16, 1-11, 2019 | 70 | 2019 |
Simultaneous quantification of N-and O-glycans using a solid-phase method S Yang, Y Hu, L Sokoll, H Zhang Nature protocols 12 (6), 1229-1244, 2017 | 68 | 2017 |
Histopathologic and proteogenomic heterogeneity reveals features of clear cell renal cell carcinoma aggressiveness Y Li, TSM Lih, SM Dhanasekaran, R Mannan, L Chen, M Cieslik, Y Wu, ... Cancer Cell 41 (1), 139-163. e17, 2023 | 66 | 2023 |
Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides Y Hu, P Shah, DJ Clark, M Ao, H Zhang Analytical chemistry 90 (13), 8065-8071, 2018 | 66 | 2018 |
Classification of Tandem Mass Spectra for Identification of N-and O-linked Glycopeptides ST Eshghi, W Yang, Y Hu, P Shah, S Sun, X Li, H Zhang Scientific Reports 6, 37189, 2016 | 60 | 2016 |
Integrated proteogenomic characterization of clear cell renal cell carcinoma DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song, Y Hu, ... Cell 180 (1), 207, 2020 | 53 | 2020 |
Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and α-1B … S Sun, Y Hu, L Jia, ST Eshghi, Y Liu, P Shah, H Zhang Analytical chemistry 90 (10), 6292-6299, 2018 | 43 | 2018 |