Social insect genomes exhibit dramatic evolution in gene composition and regulation while preserving regulatory features linked to sociality DF Simola, L Wissler, G Donahue, RM Waterhouse, M Helmkampf, ... Genome research 23 (8), 1235-1247, 2013 | 256 | 2013 |
Epigenetic (re) programming of caste-specific behavior in the ant Camponotus floridanus DF Simola, RJ Graham, CM Brady, BL Enzmann, C Desplan, A Ray, ... Science 351 (6268), aac6633, 2016 | 238 | 2016 |
Eusocial insects as emerging models for behavioural epigenetics H Yan, DF Simola, R Bonasio, J Liebig, SL Berger, D Reinberg Nature Reviews Genetics 15 (10), 677-688, 2014 | 196 | 2014 |
DNA methylation in social insects: how epigenetics can control behavior and longevity H Yan, R Bonasio, DF Simola, J Liebig, SL Berger, D Reinberg Annual Review of Entomology 60 (1), 435-452, 2015 | 167 | 2015 |
A chromatin link to caste identity in the carpenter ant Camponotus floridanus DF Simola, C Ye, NS Mutti, K Dolezal, R Bonasio, J Liebig, D Reinberg, ... Genome Research 23 (3), 486-496, 2013 | 153 | 2013 |
Mechanisms and dynamics of orphan gene emergence in insect genomes L Wissler, J Gadau, DF Simola, M Helmkampf, E Bornberg-Bauer Genome biology and evolution 5 (2), 439-455, 2013 | 151 | 2013 |
MLL1 is essential for the senescence-associated secretory phenotype BC Capell, AM Drake, J Zhu, PP Shah, Z Dou, J Dorsey, DF Simola, ... Genes & development 30 (3), 321-336, 2016 | 147 | 2016 |
The genomic impact of 100 million years of social evolution in seven ant species J Gadau, M Helmkampf, S Nygaard, J Roux, DF Simola, CR Smith, ... Trends in Genetics 28 (1), 14-21, 2012 | 128 | 2012 |
Sphingolipids, Transcription Factors, and Conserved Toolkit Genes: Developmental Plasticity in the Ant Cardiocondyla obscurior L Schrader, DF Simola, J Heinze, J Oettler Molecular Biology and Evolution 32 (6), 1474-1486, 2015 | 49 | 2015 |
Sniper: improved SNP discovery by multiply mapping deep sequenced reads DF Simola, J Kim Genome biology 12, 1-20, 2011 | 43 | 2011 |
Systematic analysis of drug targets confirms expression in disease-relevant tissues V Kumar, P Sanseau, DF Simola, MR Hurle, P Agarwal Scientific reports 6 (1), 36205, 2016 | 30 | 2016 |
Genome-Wide Survey of Natural Selection on Functional, Structural, and Network Properties of Polymorphic Sites in Saccharomyces paradoxus A Vishnoi, P Sethupathy, D Simola, JB Plotkin, S Hannenhalli Molecular biology and evolution 28 (9), 2615-2627, 2011 | 21 | 2011 |
BRD4 bimodal binding at promoters and drug-induced displacement at Pol II pause sites associates with I-BET sensitivity P Khoueiry, A Ward Gahlawat, M Petretich, AM Michon, D Simola, E Lam, ... Epigenetics & Chromatin 12, 1-18, 2019 | 20 | 2019 |
Heterochronic evolution reveals modular timing changes in budding yeast transcriptomes DF Simola, C Francis, PD Sniegowski, J Kim Genome Biology 11, 1-17, 2010 | 16 | 2010 |
Expanding bromodomain targeting into neglected parasitic diseases C Tallant, P Bamborough, C Chung, FJ Gamo, R Kirkpatrick, C Larminie, ... ACS Infectious Diseases 7 (11), 2953-2958, 2021 | 11 | 2021 |
Epigenetic programming of caste-specific division of labor in the ant Camponotus floridanus RJ Graham, DF Simola, CM Brady, BL Enzmann, C Desplan, A Ray, ... 2016 International Congress of Entomology, 2016 | | 2016 |
Social insect genomes exhibit dramatic evolution in gene composition and regulation while preserving regulatory features linked to sociality BJ Parker, DF Simola, L Wissler, G Donahue, RM Waterhouse, ... Cold Spring Harbor Laboratory Press, 2013 | | 2013 |
Social insect genomes exhibit dramatic evolution in gene DF Simola, L Wissler, G Donahue | | 2013 |
Evolution of genome-wide gene regulation in the budding yeast cell-division cycle DF Simola University of Pennsylvania, 2009 | | 2009 |
Patterns of Dendritic Translational Hotspots DF Simola | | 2005 |