The khmer software package: enabling efficient nucleotide sequence analysis MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ... F1000Research 4, 2015 | 375* | 2015 |
Scaling metagenome sequence assembly with probabilistic de Bruijn graphs J Pell, A Hintze, R Canino-Koning, A Howe, JM Tiedje, CT Brown Proc. Natl. Acad. Sci. U.S.A. 109 (33), 13272-13277, 2012 | 288 | 2012 |
The genome and developmental transcriptome of the strongylid nematode Haemonchus contortus EM Schwarz, PK Korhonen, BE Campbell, ND Young, AR Jex, A Jabbar, ... Genome biology 14, 1-18, 2013 | 238 | 2013 |
These are not the k-mers you are looking for: efficient online k-mer counting using a probabilistic data structure Q Zhang, J Pell, R Canino-Koning, AC Howe, CT Brown PloS one 9 (7), e101271, 2014 | 95 | 2014 |
The khmer software package: enabling efficient sequence analysis M Crusoe, G Edvenson, J Fish, A Howe, E McDonald, J Nahum, ... URL http://dx. doi. org/10.6084/m9. figshare 979190, 2014 | 26 | 2014 |
Illumina sequencing artifacts revealed by connectivity analysis of metagenomic datasets AC Howe, J Pell, R Canino-Koning, R Mackelprang, S Tringe, J Jansson, ... arXiv preprint arXiv:1212.0159, 2012 | 6 | 2012 |
khmer k-mer counting & filtering FTW MR Crusoe, G Edvenson, J Fish, A Howe, L Irber, E McDonald, J Nahum, ... | 6 | 2010 |
Approaches to Scaling and Improving Metagenome Sequence Assembly JA Pell Michigan State University. Computer Science, 2013 | | 2013 |
The khmer software package: enabling efficient nucleotide MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ... | | |