Dynamical aspects of quantum entanglement for weakly coupled kicked tops H Fujisaki, T Miyadera, A Tanaka Physical Review E 67 (6), 066201, 2003 | 157 | 2003 |
Vibrational energy relaxation in proteins H Fujisaki, JE Straub Proceedings of the National Academy of Sciences 102 (19), 6726-6731, 2005 | 153 | 2005 |
Minimum free energy path of ligand-induced transition in adenylate kinase Y Matsunaga, H Fujisaki, T Terada, T Furuta, K Moritsugu, A Kidera PLoS computational biology 8 (6), e1002555, 2012 | 108 | 2012 |
Time-dependent perturbation theory for vibrational energy relaxation and dephasing in peptides and proteins H Fujisaki, Y Zhang, JE Straub The Journal of chemical physics 124 (14), 2006 | 66 | 2006 |
Saturation of the production of quantum entanglement between weakly coupled mapping systems in a strongly chaotic region A Tanaka, H Fujisaki, T Miyadera Physical Review E 66 (4), 045201, 2002 | 66 | 2002 |
Efforts toward developing direct probes of protein dynamics ME Cremeens, H Fujisaki, Y Zhang, J Zimmermann, LB Sagle, S Matsuda, ... Journal of the American Chemical Society 128 (18), 6028-6029, 2006 | 57 | 2006 |
Quantum dynamics of N-methylacetamide studied by the vibrational configuration interaction method H Fujisaki, K Yagi, K Hirao, JE Straub Chemical Physics Letters 443 (1-3), 6-11, 2007 | 54 | 2007 |
Molecular dynamics study on the solvent dependent heme cooling following ligand photolysis in carbonmonoxy myoglobin Y Zhang, H Fujisaki, JE Straub The Journal of Physical Chemistry B 111 (12), 3243-3250, 2007 | 52 | 2007 |
Onsager–Machlup action-based path sampling and its combination with replica exchange for diffusive and multiple pathways H Fujisaki, M Shiga, A Kidera The Journal of chemical physics 132 (13), 2010 | 42 | 2010 |
Energetics and conformational pathways of functional rotation in the multidrug transporter AcrB Y Matsunaga, T Yamane, T Terada, K Moritsugu, H Fujisaki, S Murakami, ... Elife 7, e31715, 2018 | 40 | 2018 |
Dynamic treatment of vibrational energy relaxation in a heterogeneous and fluctuating environment H Fujisaki, G Stock The Journal of chemical physics 129 (13), 2008 | 38 | 2008 |
Vibrational energy relaxation of isotopically labeled amide I modes in cytochrome c: Theoretical investigation of vibrational energy relaxation rates and pathways H Fujisaki, JE Straub The Journal of Physical Chemistry B 111 (41), 12017-12023, 2007 | 37 | 2007 |
Different inhibitory potency of febuxostat towards mammalian and bacterial xanthine oxidoreductases: insight from molecular dynamics H Kikuchi, H Fujisaki, T Furuta, K Okamoto, S Leimkühler, T Nishino Scientific Reports 2 (1), 331, 2012 | 35 | 2012 |
Mode-Specific Vibrational Energy Relaxation of Amide I′ and II′ Modes in N-Methylacetamide/Water Clusters: Intra- and Intermolecular Energy Transfer … Y Zhang, H Fujisaki, JE Straub The Journal of Physical Chemistry A 113 (13), 3051-3060, 2009 | 33 | 2009 |
Extended phase-space methods for enhanced sampling in molecular simulations: a review H Fujisaki, K Moritsugu, Y Matsunaga, T Morishita, L Maragliano Frontiers in bioengineering and biotechnology 3, 125, 2015 | 29 | 2015 |
Multiscale enhanced path sampling based on the Onsager-Machlup action: Application to a model polymer H Fujisaki, M Shiga, K Moritsugu, A Kidera The Journal of Chemical Physics 139 (5), 2013 | 28 | 2013 |
Protein functional motions: basic concepts and computational methodologies S Fuchigami, H Fujisaki, Y Matsunaga, A Kidera Advancing Theory for Kinetics and Dynamics of Complex, Many‐Dimensional …, 2011 | 28 | 2011 |
Quantum and classical vibrational relaxation dynamics of N‐methylacetamide on ab initio potential energy surfaces H Fujisaki, K Yagi, JE Straub, G Stock International Journal of Quantum Chemistry 109 (10), 2047-2057, 2009 | 28 | 2009 |
A4-sized liquid crystal displays with flexible light guide plate H Sato, H Fujikake, H Fujisaki, S Suzuki, D Nakayama, T Furukawa, ... 13th International Display Workshops, IDW'06, 2006 | 24 | 2006 |
Conformational change of a biomolecule studied by the weighted ensemble method: Use of the diffusion map method to extract reaction coordinates H Fujisaki, K Moritsugu, A Mitsutake, H Suetani The Journal of chemical physics 149 (13), 2018 | 23 | 2018 |