Phylogenomics and species delimitation of a complex radiation of Neotropical suboscine birds (Pachyramphus) LJ Musher, J Cracraft Molecular Phylogenetics and Evolution 118, 204-221, 2018 | 44 | 2018 |
The origin and evolution of Amazonian species diversity J Cracraft, CC Ribas, FM d’Horta, J Bates, RP Almeida, A Aleixo, ... Neotropical diversification: Patterns and processes, 225-244, 2020 | 40 | 2020 |
River network rearrangements promote speciation in lowland Amazonian birds LJ Musher, M Giakoumis, JS Albert, GC Del Rio, MA Rêgo, G Thom, ... Science advances 8 (14), eabn1099, 2022 | 38 | 2022 |
Influence of human population size and the built environment on avian assemblages in urban green spaces SC Latta, LJ Musher, KN Latta, TE Katzner Urban Ecosystems 16, 463-479, 2013 | 31 | 2013 |
Underestimated and cryptic diversification patterns across Afro‐tropical lowland forests JW Huntley, KD Keith, AA Castellanos, LJ Musher, G Voelker Journal of Biogeography 46 (2), 381-391, 2019 | 30 | 2019 |
Why is Amazonia a ‘source’of biodiversity? Climate-mediated dispersal and synchronous speciation across the Andes in an avian group (Tityrinae) LJ Musher, M Ferreira, AL Auerbach, J McKay, J Cracraft Proceedings of the Royal Society B 286 (1900), 20182343, 2019 | 29 | 2019 |
A Multireference-Based Whole Genome Assembly for the Obligate Ant-Following Antbird, Rhegmatorhina melanosticta (Thamnophilidae) LA Coelho, LJ Musher, J Cracraft Diversity 11 (9), 144, 2019 | 14 | 2019 |
Shifting ecosystem connectivity during the Pleistocene drove diversification and gene‐flow in a species complex of Neotropical birds (Tityridae: Pachyramphus) LJ Musher, PJ Galante, G Thom, JW Huntley, ME Blair Journal of Biogeography 47 (8), 1714-1726, 2020 | 13 | 2020 |
Verbalizing phylogenomic conflict: Representation of node congruence across competing reconstructions of the neoavian explosion NM Franz, LJ Musher, JW Brown, S Yu, B Ludäscher PLoS computational biology 15 (2), e1006493, 2019 | 7 | 2019 |
Evidence of introgression, ecological divergence and adaptation in Asterias sea stars M Giakoumis, GE Pinilla‐Buitrago, LJ Musher, JP Wares, SJE Baird, ... Molecular Ecology 32 (20), 5541-5557, 2023 | 5 | 2023 |
Geogenomic Predictors of Genetree Heterogeneity Explain Phylogeographic and Introgression History: A Case Study in an Amazonian Bird (Thamnophilus aethiops) LJ Musher, G Del-Rio, RS Marcondes, RT Brumfield, GA Bravo, G Thom Systematic Biology 73 (1), 36-52, 2024 | 3 | 2024 |
Curlew Sandpipers Calidris ferruginea in the western Atlantic: the first, second, and third Brazilian records from Ceará and Maranhão LJ Musher, AC Lees, BJM Almeida, RC Rodrigues, CE Fedrizzi, ... Revista Brasileira de Ornitologia 24, 62-67, 2016 | 3 | 2016 |
Underestimated Neotropical diversity: Integrative taxonomy reveals two unrelated look-alike species in a suboscine bird (Pachyramphus albogriseus) LJ Musher, NK Krabbe, JI Areta Ornithology 140 (1), ukac047, 2023 | 2 | 2023 |
Whole-genome phylogenomics of the tinamous (Aves: Tinamidae): comparing gene tree estimation error between BUSCOs and UCEs illuminates rapid divergence with introgression LJ Musher, TA Catanach, T Valqui, RT Brumfield, A Aleixo, KP Johnson, ... bioRxiv, 2024.01. 22.576737, 2024 | | 2024 |
Amazonian avian biogeography: Broadscale patterns, microevolutionary processes, and habitat-specific models revealed by multidisciplinary approaches JMG Capurucho, LJ Musher, A Lees, MA Rego, G Del-Rio, A Aleixo, ... Ornithology 141 (1), ukad051, 2024 | | 2024 |
Geogenomic predictors of genetree heterogeneity in an Amazonian bird (Thamnophilus aethiops) LJ Musher, G Del-Rio, RS Marcondes, RT Brumfield, GA Bravo, G Thom bioRxiv, 2023.08. 22.554279, 2023 | | 2023 |
Identification of Male Euphagus Blackbirds in Fresh Fall Plumages LJ Musher, P Pyle, DS Irons, JR Tietz Western Birds 48, 205-210, 2017 | | 2017 |