| The gene ontology resource: 20 years and still GOing strong Gene Ontology Consortium Nucleic acids research 47 (D1), D330-D338, 2019 | 3611 | 2019 |
| The Gene Ontology resource: enriching a GOld mine S Carbon, E Douglass, BM Good, DR Unni, NL Harris, CJ Mungall, ... Nucleic Acids Research, 2020 | 2634* | 2020 |
| The genome sequence of the plant pathogen Xylella fastidiosa AJG Simpson, FC Reinach, P Arruda, FA Abreu, M Acencio, R Alvarenga, ... Nature 406 (6792), 151-157, 2000 | 1110 | 2000 |
| HTRIdb: an open-access database for experimentally verified human transcriptional regulation interactions LA Bovolenta, ML Acencio, N Lemke BMC Genomics 13 (1), 405, 2012 | 285 | 2012 |
| Towards the prediction of essential genes by integration of network topology, cellular localization and biological process information M Acencio, N Lemke BMC bioinformatics 10 (1), 290, 2009 | 215 | 2009 |
| The generation and utilization of a cancer-oriented representation of the human transcriptome by using expressed sequence tags H Brentani, OL Caballero, AA Camargo, AM Da Silva, WA Da Silva, ... Proceedings of the National Academy of Sciences of the United States of …, 2003 | 145 | 2003 |
| Identification of human chromosome 22 transcribed sequences with ORF expressed sequence tags SJ De Souza, AA Camargo, MRS Briones, FF Costa, MA Nagai, ... Proceedings of the National Academy of Sciences 97 (23), 12690, 2000 | 96 | 2000 |
| Predicting essential genes and proteins based on machine learning and network topological features: a comprehensive review X Zhang, ML Acencio, N Lemke Frontiers in Physiology 7, 75, 2016 | 95 | 2016 |
| A machine learning approach for genome-wide prediction of morbid and druggable human genes based on systems-level data PR Costa, ML Acencio, N Lemke BMC genomics 11 (Suppl 5), S9, 2010 | 90 | 2010 |
| COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms M Ostaszewski, A Niarakis, A Mazein, I Kuperstein, R Phair, ... Molecular systems biology 17 (10), e10387, 2021 | 85 | 2021 |
| Prediction of druggable proteins using machine learning and systems biology: a mini-review G Kandoi, ML Acencio, N Lemke Frontiers in physiology 6, 366, 2015 | 74 | 2015 |
| The development of a universal in silico predictor of protein-protein interactions GT Valente, ML Acencio, C Martins, N Lemke PLoS One 8 (5), e65587, 2013 | 53 | 2013 |
| Biomarkers of disease progression in people with psoriasis: a scoping review R Ramessur, M Corbett, D Marshall, ML Acencio, IA Barbosa, N Dand, ... British Journal of Dermatology, 2022 | 43 | 2022 |
| In silico network topology-based prediction of gene essentiality JPM da Silva, ML Acencio, JCM Mombach, R Vieira, JC da Silva, ... Physica A: Statistical Mechanics and its Applications 387 (4), 1049-1055, 2008 | 36 | 2008 |
| CausalTAB: the PSI-MITAB 2.8 updated format for signalling data representation and dissemination L Perfetto, ML Acencio, G Bradley, G Cesareni, N Del Toro, D Fazekas, ... Bioinformatics 35 (19), 3779-3785, 2019 | 32 | 2019 |
| Genome-wide microRNA screening in Nile tilapia reveals pervasive isomiRs’ transcription, sex-biased arm switching and increasing complexity of expression throughout development D Pinhal, LA Bovolenta, S Moxon, AC Oliveira, PG Nachtigall, ML Acencio, ... Scientific reports 8 (1), 8248, 2018 | 29 | 2018 |
| A GO catalogue of human DNA-binding transcription factors RC Lovering, P Gaudet, ML Acencio, A Ignatchenko, A Jolma, O Fornes, ... Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms, 194765, 2021 | 25 | 2021 |
| Unravelling the Neospora caninum secretome through the secreted fraction (ESA) and quantification of the discharged tachyzoite using high-resolution mass spectrometry-based … L Pollo-Oliveira, H Post, ML Acencio, N Lemke, H van den Toorn, ... Parasites & vectors 6 (1), 335, 2013 | 22 | 2013 |
| Biomarkers of systemic treatment response in people with psoriasis: a scoping review M Corbett, R Ramessur, D Marshall, ML Acencio, M Ostaszewski, ... British Journal of Dermatology, 2022 | 20 | 2022 |
| The Minimum Information about a Molecular Interaction Causal Statement (MI2CAST) V Touré, S Vercruysse, ML Acencio, RC Lovering, S Orchard, G Bradley, ... Bioinformatics, 2020 | 19 | 2020 |
