SARS-CoV-2 variant of concern 202012/01 has about twofold replicative advantage and acquires concerning mutations F Grabowski, G Preibisch, S Giziński, M Kochańczyk, T Lipniacki Viruses 13 (3), 392, 2021 | 111 | 2021 |
The spread of SARS-CoV-2 variant Omicron with a doubling time of 2.0–3.3 days can be explained by immune evasion F Grabowski, M Kochańczyk, T Lipniacki Viruses 14 (2), 294, 2022 | 102 | 2022 |
Cell fate in antiviral response arises in the crosstalk of IRF, NF-κB and JAK/STAT pathways M Czerkies, Z Korwek, W Prus, M Kochańczyk, J Jaruszewicz-Błońska, ... Nature Communications 9 (1), 493, 2018 | 93 | 2018 |
Spontaneous NF-κB activation by autocrine TNFα signaling: A computational analysis J Pękalski, PJ Zuk, M Kochańczyk, M Junkin, R Kellogg, S Tay, T Lipniacki PLOS ONE 8 (11), e78887, 2013 | 75 | 2013 |
Prediction of functional sites based on the fuzzy oil drop model M Bryliński, K Prymula, W Jurkowski, M Kochańczyk, E Stawowczyk, ... PLoS Computational Biology 3 (5), e94, 2007 | 68 | 2007 |
Relaxation oscillations and hierarchy of feedbacks in MAPK signaling M Kochańczyk, P Kocieniewski, E Kozłowska, J Jaruszewicz-Błońska, ... Scientific Reports 7, 38244, 2017 | 64 | 2017 |
Dynamics of COVID-19 pandemic at constant and time-dependent contact rates M Kochańczyk, F Grabowski, T Lipniacki Mathematical Modelling of Natural Phenomena 15, 28, 2020 | 58 | 2020 |
Super-spreading events initiated the exponential growth phase of COVID-19 with ℛ0 higher than initially estimated M Kochańczyk, F Grabowski, T Lipniacki Royal Society Open Science 7 (9), 200786, 2020 | 55 | 2020 |
Feedbacks, bifurcations, and cell fate decision-making in the p53 system B Hat, M Kochańczyk, MN Bogdał, T Lipniacki PLOS Computational Biology 12 (2), e1004787, 2016 | 53 | 2016 |
RAF1/BRAF dimerization integrates the signal from RAS to ERK and ROKα A Varga, K Ehrenreiter, B Aschenbrenner, P Kocieniewski, M Kochanczyk, ... Science Signaling 10 (469), eaai8482, 2017 | 52 | 2017 |
Omicron strain spreads with the doubling time of 3.2—3.6 days in South Africa province of Gauteng that achieved herd immunity to Delta variant F Grabowski, M Kochańczyk, T Lipniacki MedRxiv 10 (2021.12), 08.21267494, 2021 | 48 | 2021 |
Pareto-based evaluation of national responses to COVID-19 pandemic shows that saving lives and protecting economy are non-trade-off objectives M Kochańczyk, T Lipniacki Scientific Reports 11 (1), 1-9, 2021 | 43 | 2021 |
Levels of pro-apoptotic regulator Bad and anti-apoptotic regulator Bcl-xL determine the type of the apoptotic logic gate MN Bogdał, B Hat, M Kochańczyk, T Lipniacki BMC Systems Biology 7, 67, 2013 | 36 | 2013 |
Localization of ligand binding site in proteins identified in silico M Brylinski, M Kochanczyk, E Broniatowska, I Roterman Journal of Molecular Modeling 13 (6-7), 665-675, 2007 | 26 | 2007 |
L18F substrain of SARS-CoV-2 VOC-202012/01 is rapidly spreading in England F Grabowski, M Kochańczyk, T Lipniacki MedRxiv, 2021.02. 07.21251262, 2021 | 22 | 2021 |
A mathematical model of bimodal epigenetic control of miR-193a in ovarian cancer stem cells FHC Cheng, BD Aguda, JC Tsai, M Kochańczyk, JMJ Lin, GCW Chen, ... PLOS ONE 9 (12), e116050, 2014 | 22 | 2014 |
Information processing in the NF-κB pathway K Tudelska, J Markiewicz, M Kochańczyk, M Czerkies, W Prus, Z Korwek, ... Scientific Reports 7, 15926, 2017 | 21 | 2017 |
Stochastic transitions in a bistable reaction system on the membrane M Kochańczyk, J Jaruszewicz, T Lipniacki Journal of the Royal Society Interface 10 (84), 20130151, 2013 | 21 | 2013 |
Dynamics of a stochastic spatially extended system predicted by comparing deterministic and stochastic attractors of the corresponding birth-death process PJ Zuk, M Kochańczyk, J Jaruszewicz, W Bednorz, T Lipniacki Physical Biology 9 (5), 055002, 2012 | 19 | 2012 |
In silico structural study of random amino acid sequence proteins not present in nature K Prymula, M Piwowar, M Kochanczyk, L Flis, M Malawski, T Szepieniec, ... Chemistry & Biodiversity 6 (12), 2311-2336, 2009 | 17 | 2009 |