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John Zobolas
John Zobolas
在 medisin.uio.no 的电子邮件经过验证 - 首页
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CausalTAB: the PSI-MITAB 2.8 updated format for signalling data representation and dissemination
L Perfetto, ML Acencio, G Bradley, G Cesareni, N Del Toro, D Fazekas, ...
Bioinformatics 35 (19), 3779-3785, 2019
322019
Boolean function metrics can assist modelers to check and choose logical rules
J Zobolas, PT Monteiro, M Kuiper, Å Flobak
Journal of Theoretical Biology, 111025, 2022
72022
CausalBuilder: bringing the MI2CAST causal interaction annotation standard to the curator
V Touré, J Zobolas, M Kuiper, S Vercruysse
Database 2021, baaa107, 2021
72021
VSM-box: general-purpose interface for biocuration and knowledge representation
S Vercruysse, J Zobolas, V Touré, MK Andersen, M Kuiper
Preprints, 2020
62020
UniBioDicts: Unified access to biological dictionaries
J Zobolas, V Touré, M Kuiper, S Vercruysse
Bioinformatics 37 (1), 143-144, 2020
52020
IIb‐RAD‐sequencing coupled with random forest classification indicates regional population structuring and sex‐specific differentiation in salmon lice (Lepeophtheirus salmonis)
P Guragain, AS Båtnes, J Zobolas, Y Olsen, AM Bones, P Winge
Ecology and Evolution 12 (4), e8809, 2022
42022
Tutorial on survival modeling with applications to omics data
Z Zhao, J Zobolas, M Zucknick, T Aittokallio
Bioinformatics 40 (3), btae132, 2024
3*2024
Fine tuning a logical model of cancer cells to predict drug synergies: combining manual curation and automated parameterization
Å Flobak, J Zobolas, M Vazquez, TS Steigedal, L Thommesen, ...
Frontiers in Systems Biology 3, 1252961, 2023
2*2023
emba: R package for analysis and visualization of biomarkers in boolean model ensembles
J Zobolas, M Kuiper, Å Flobak
Journal of open source software 5 (53), 2583, 2020
22020
Software implementations allowing new approaches toward data analysis, modeling and curation of biological knowledge for Systems Medicine
J Zobolas
NTNU, 2021
12021
Linking PubDictionaries with UniBioDicts to support Community Curation
J Zobolas, JD Kim, M Kuiper, S Vercruysse
BioHackrXiv, 2020
12020
A Large-Scale Neutral Comparison Study of Survival Models on Low-Dimensional Data
L Burk, J Zobolas, B Bischl, A Bender, MN Wright, R Sonabend
arXiv preprint arXiv:2406.04098, 2024
2024
Survival modeling in mlr3 using Bayesian Additive Regression Trees (BART) Demonstrate use of survival BART on the lung dataset via mlr3proba and distr6.
J Zobolas
2023
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