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Zhijiang Yang
Zhijiang Yang
State Key Laboratory of NBC Protection for Civilian
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ADMETlab 2.0: an integrated online platform for accurate and comprehensive predictions of ADMET properties
G Xiong, Z Wu, J Yi, L Fu, Z Yang, C Hsieh, M Yin, X Zeng, C Wu, A Lu, ...
Nucleic acids research 49 (W1), W5-W14, 2021
13952021
MG-BERT: leveraging unsupervised atomic representation learning for molecular property prediction
XC Zhang, CK Wu, ZJ Yang, ZX Wu, JC Yi, CY Hsieh, TJ Hou, DS Cao
Briefings in bioinformatics 22 (6), bbab152, 2021
1052021
DDInter: an online drug–drug interaction database towards improving clinical decision-making and patient safety
G Xiong, Z Yang, J Yi, N Wang, L Wang, H Zhu, C Wu, A Lu, X Chen, S Liu, ...
Nucleic acids research 50 (D1), D1200-D1207, 2022
672022
Structural analysis and identification of colloidal aggregators in drug discovery
ZY Yang, ZJ Yang, J Dong, LL Wang, LX Zhang, JJ Ding, XQ Ding, AP Lu, ...
Journal of chemical information and modeling 59 (9), 3714-3726, 2019
572019
Systematic Modeling of log D7.4 Based on Ensemble Machine Learning, Group Contribution, and Matched Molecular Pair Analysis
L Fu, L Liu, ZJ Yang, P Li, JJ Ding, YH Yun, AP Lu, TJ Hou, DS Cao
Journal of chemical information and modeling 60 (1), 63-76, 2019
442019
Scopy: an integrated negative design python library for desirable HTS/VS database design
ZY Yang, ZJ Yang, AP Lu, TJ Hou, DS Cao
Briefings in Bioinformatics 22 (3), bbaa194, 2021
322021
Learning to SMILES: BAN-based strategies to improve latent representation learning from molecules
CK Wu, XC Zhang, ZJ Yang, AP Lu, TJ Hou, DS Cao
Briefings in bioinformatics 22 (6), bbab327, 2021
292021
Structural analysis and identification of false positive hits in luciferase-based assays
ZY Yang, J Dong, ZJ Yang, AP Lu, TJ Hou, DS Cao
Journal of Chemical Information and Modeling 60 (4), 2031-2043, 2020
232020
Benchmarking the mechanisms of frequent hitters: limitation of PAINS alerts
ZY Yang, ZJ Yang, JH He, AP Lu, S Liu, TJ Hou, DS Cao
Drug Discovery Today 26 (6), 1353-1358, 2021
202021
QSAR-assisted-MMPA to expand chemical transformation space for lead optimization
L Fu, ZY Yang, ZJ Yang, MZ Yin, AP Lu, X Chen, S Liu, TJ Hou, DS Cao
Briefings in Bioinformatics 22 (5), bbaa374, 2021
152021
ChemFLuo: a web-server for structure analysis and identification of fluorescent compounds
ZY Yang, J Dong, ZJ Yang, M Yin, HL Jiang, AP Lu, X Chen, TJ Hou, ...
Briefings in bioinformatics 22 (4), bbaa282, 2021
102021
PySmash: Python package and individual executable program for representative substructure generation and application
ZY Yang, ZJ Yang, Y Zhao, MZ Yin, AP Lu, X Chen, S Liu, TJ Hou, ...
Briefings in Bioinformatics 22 (5), bbab017, 2021
92021
Systematic comparison of ligand-based and structure-based virtual screening methods on poly (ADP-ribose) polymerase-1 inhibitors
Y Zhao, XG Wang, ZY Ma, GL Xiong, ZJ Yang, Y Cheng, AP Lu, ZJ Huang, ...
Briefings in Bioinformatics 22 (6), bbab135, 2021
62021
Simple and high-precision DFT-QSPR prediction of enthalpy of combustion for sesquiterpenoid high-energy–density fuels
H Yang, ZJ Yang, QF Yang, XM Wei, YQ Yuan, LL Wang, YF Hu, JJ Ding
Fuel 332, 126157, 2023
52023
MPEK: a multi-task learning based on pre-trained language model for predicting enzymatic reaction kinetic parameters
H Jiang, J Wang, Z Yang, C Chen, G Yao, S Bao, X Wan, J Ding, L Wang
32024
ChemMORT: an automatic ADMET optimization platform using deep learning and multi-objective particle swarm optimization
JC Yi, ZY Yang, WT Zhao, ZJ Yang, XC Zhang, CK Wu, AP Lu, DS Cao
Briefings in Bioinformatics 25 (2), bbae008, 2024
22024
Discovery of novel TRPV1 modulators through machine learning‐based molecular docking and molecular similarity searching
X Wei, Q Yang, Z Yang, T Huang, H Yang, L Wang, L Pan, J Ding
Chemical Biology & Drug Design 102 (3), 409-423, 2023
22023
QuanDB: a quantum chemical property database towards enhancing 3D molecular representation learning
Z Yang, T Huang, L Pan, J Wang, L Wang, J Ding, J Xiao
Journal of cheminformatics 16 (1), 48, 2024
12024
Conf-GEM: a geometric information-assisted direct conformation generation model
Z Yang, Y Xu, L Pan, T Huang, Y Wang, J Ding, L Wang, J Xiao
Artificial Intelligence Chemistry, 100074, 2024
2024
MPEK: a multitask deep learning framework based on pretrained language models for enzymatic reaction kinetic parameters prediction
J Wang, Z Yang, C Chen, G Yao, X Wan, S Bao, J Ding, L Wang, H Jiang
Briefings in Bioinformatics 25 (5), 2024
2024
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