CMNPD: a comprehensive marine natural products database towards facilitating drug discovery from the ocean C Lyu, T Chen, B Qiang, N Liu, H Wang, L Zhang, Z Liu Nucleic Acids Research 49 (D1), D509-D515, 2021 | 141 | 2021 |
Drugclip: Contrasive protein-molecule representation learning for virtual screening B Gao, B Qiang, H Tan, Y Jia, M Ren, M Lu, J Liu, WY Ma, Y Lan Advances in Neural Information Processing Systems 36, 2024 | 14 | 2024 |
Target prediction model for natural products using transfer learning B Qiang, J Lai, H Jin, L Zhang, Z Liu International Journal of Molecular Sciences 22 (9), 4632, 2021 | 11 | 2021 |
Coarse-to-fine: a hierarchical diffusion model for molecule generation in 3d B Qiang, Y Song, M Xu, J Gong, B Gao, H Zhou, WY Ma, Y Lan International Conference on Machine Learning, 28277-28299, 2023 | 8 | 2023 |
Chemical space, scaffolds, and halogenated compounds of CMNPD: A comprehensive chemoinformatic analysis N Liu, J Lai, C Lyu, B Qiang, H Wang, H Jin, L Zhang, Z Liu Journal of Chemical Information and Modeling 61 (7), 3323-3336, 2021 | 6 | 2021 |
Exploring chemical reaction space with machine learning models: Representation and feature perspective Y Ding, B Qiang, Q Chen, Y Liu, L Zhang, Z Liu Journal of Chemical Information and Modeling 64 (8), 2955-2970, 2024 | 5 | 2024 |
Bridging the gap between chemical reaction pretraining and conditional molecule generation with a unified model B Qiang, Y Zhou, Y Ding, N Liu, S Song, L Zhang, B Huang, Z Liu Nature Machine Intelligence 5 (12), 1476-1485, 2023 | 2 | 2023 |
Rethinking Specificity in SBDD: Leveraging Delta Score and Energy-Guided Diffusion B Gao, M Ren, Y Ni, Y Huang, B Qiang, ZM Ma, WY Ma, Y Lan arXiv preprint arXiv:2403.12987, 2024 | 1 | 2024 |
PROflow: An iterative refinement model for PROTAC-induced structure prediction B Qiang, W Shi, Y Song, M Wu arXiv preprint arXiv:2405.06654, 2024 | | 2024 |
Delta Score: Improving the Binding Assessment of Structure-Based Drug Design Methods M Ren, B Gao, B Qiang, Y Lan arXiv preprint arXiv:2311.12035, 2023 | | 2023 |
Uni-RXN: A Unified Framework Bridging the Gap between Chemical Reaction Pretraining and Conditional Molecule Generation B Qiang, Y Zhou, Y Ding, N Liu, S Song, L Zhang, B Huang, Z Liu | | 2023 |
A HIERARCHICAL FRAGMENT-BASED MODEL FOR 3D DRUG-LIKE MOLECULE GENERATION B Qiang, Y Song, M Xu, J Gong, H Zhou, WY Ma, Y Lan | | |