| LongStitch: high-quality genome assembly correction and scaffolding using long reads L Coombe, JX Li, T Lo, J Wong, V Nikolic, RL Warren, I Birol BMC bioinformatics 22, 1-13, 2021 | 34 | 2021 |
| Recurrent tumor-specific regulation of alternative polyadenylation of cancer-related genes Z Xue, RL Warren, EA Gibb, D MacMillan, J Wong, R Chiu, SA Hammond, ... BMC genomics 19, 1-12, 2018 | 33 | 2018 |
| Spruce giga‐genomes: structurally similar yet distinctive with differentially expanding gene families and rapidly evolving genes KK Gagalova, RL Warren, L Coombe, J Wong, KM Nip, MMS Yuen, ... The Plant Journal 111 (5), 1469-1485, 2022 | 21 | 2022 |
| ntHash2: recursive spaced seed hashing for nucleotide sequences P Kazemi, J Wong, V Nikolić, H Mohamadi, RL Warren, I Birol Bioinformatics 38 (20), 4812-4813, 2022 | 13 | 2022 |
| Linear time complexity de novo long read genome assembly with GoldRush J Wong, L Coombe, V Nikolić, E Zhang, KM Nip, P Sidhu, RL Warren, ... Nature Communications 14 (1), 2906, 2023 | 12 | 2023 |
| ntLink: A Toolkit for De Novo Genome Assembly Scaffolding and Mapping Using Long Reads L Coombe, RL Warren, J Wong, V Nikolic, I Birol Current protocols 3 (4), e733, 2023 | 8 | 2023 |
| btllib: A C++ library with Python interface for efficient genomic sequence processing V Nikolić, P Kazemi, L Coombe, J Wong, A Afshinfard, J Chu, RL Warren, ... Journal of Open Source Software 7 (79), 4720, 2022 | 7 | 2022 |
| Physlr: next-generation physical maps A Afshinfard, SD Jackman, J Wong, L Coombe, J Chu, V Nikolic, G Dilek, ... DNA 2 (2), 116-130, 2022 | 6 | 2022 |
| NtEdit+ sealer: Efficient targeted error resolution and automated finishing of long‐read genome assemblies JX Li, L Coombe, J Wong, I Birol, RL Warren Current protocols 2 (5), e442, 2022 | 5 | 2022 |
| RResolver: efficient short-read repeat resolution within ABySS V Nikolić, A Afshinfard, J Chu, J Wong, L Coombe, KM Nip, RL Warren, ... BMC bioinformatics 23 (1), 246, 2022 | 1 | 2022 |
| Multi-genome synteny detection using minimizer graph mappings L Coombe, P Kazemi, J Wong, I Birol, RL Warren bioRxiv, 2024.02. 07.579356, 2024 | | 2024 |
| Human ancestry inference at scale, from genomic data RL Warren, L Coombe, J Wong, P Kazemi, I Birol bioRxiv, 2024.03. 26.586646, 2024 | | 2024 |
| aaHash: recursive amino acid sequence hashing J Wong, P Kazemi, L Coombe, RL Warren, I Birol Bioinformatics Advances 3 (1), vbad162, 2023 | | 2023 |
| PathOGiST: A Novel Method for Clustering Pathogen Isolates by Combining Multiple Genotyping Signals M Katebi, P Feijao, J Booth, M Mansouri, S La, A Sweeten, ... Algorithms for Computational Biology: 7th International Conference, AlCoB …, 2020 | | 2020 |
| GoldRush-Edit: A targeted, alignment-free polishing & finishing pipeline for long read assembly, using long read k-mers V Nikolić, L Coombe, J Wong, J Li, R Warren, I Birol | | |
| btllib: A C++ library with Python interface for efficient sequence processing V Nikolić, P Kazemi, L Coombe, J Wong, A Afshinfard, R Warren, I Birol | | |
| Supplementary material for ntHash2: Recursive Spaced Seed Hashing for Nucleotide Sequences P Kazemi, J Wong, V Nikolić, H Mohamadi, RL Warren, I Birol | | |
Inanc BirolGenome Sciences Centre, BC Cancer Agency在 bcgsc.ca 的电子邮件经过验证
