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David R Cooper
David R Cooper
Research Assistant Professor, University of Virginia
在 virginia.edu 的电子邮件经过验证
标题
引用次数
引用次数
年份
Toward rational protein crystallization: A Web server for the design of crystallizable protein variants
L Goldschmidt, DR Cooper, ZS Derewenda, D Eisenberg
Protein Science 16 (8), 1569-1576, 2007
3502007
CheckMyMetal: a macromolecular metal-binding validation tool
H Zheng, DR Cooper, PJ Porebski, IG Shabalin, KB Handing, W Minor
Acta Crystallographica Section D: Structural Biology 73 (3), 223-233, 2017
3182017
Validation of metal-binding sites in macromolecular structures with the CheckMyMetal web server
H Zheng, MD Chordia, DR Cooper, M Chruszcz, P Müller, GM Sheldrick, ...
Nature protocols 9 (1), 156-170, 2014
3022014
Protein crystallization by surface entropy reduction: optimization of the SER strategy
DR Cooper, T Boczek, K Grelewska, M Pinkowska, M Sikorska, ...
Acta Crystallographica Section D: Biological Crystallography 63 (5), 636-645, 2007
2072007
The structure of the N-terminal domain of the product of the lissencephaly gene Lis1 and its functional implications
MH Kim, DR Cooper, A Oleksy, Y Devedjiev, U Derewenda, O Reiner, ...
Structure 12 (6), 987-998, 2004
1472004
PDZ tandem of human syntenin: crystal structure and functional properties
BS Kang, DR Cooper, F Jelen, Y Devedjiev, U Derewenda, Z Dauter, ...
Structure 11 (4), 459-468, 2003
1292003
Urkinase: structure of acetate kinase, a member of the ASKHA superfamily of phosphotransferases
KA Buss, DR Cooper, C Ingram-Smith, JG Ferry, DA Sanders, MS Hasson
Journal of bacteriology 183 (2), 680-686, 2001
1212001
A public database of macromolecular diffraction experiments
M Grabowski, KM Langner, M Cymborowski, PJ Porebski, P Sroka, ...
Biological Crystallography 72 (11), 1181-1193, 2016
1092016
Molecular roots of degenerate specificity in syntenin's PDZ2 domain: reassessment of the PDZ recognition paradigm
BS Kang, DR Cooper, Y Devedjiev, U Derewenda, ZS Derewenda
Structure 11 (7), 845-853, 2003
1062003
The structure of the coiled-coil domain of Ndel1 and the basis of its interaction with Lis1, the causal protein of Miller-Dieker lissencephaly
U Derewenda, C Tarricone, WC Choi, DR Cooper, S Lukasik, F Perrina, ...
Structure 15 (11), 1467-1481, 2007
962007
The crystal structure of the reduced, Zn2+-bound form of the B. subtilis Hsp33 chaperone and its implications for the activation mechanism
I Janda, Y Devedjiev, U Derewenda, Z Dauter, J Bielnicki, DR Cooper, ...
Structure 12 (10), 1901-1907, 2004
882004
X-ray crystallography: assessment and validation of protein–small molecule complexes for drug discovery
DR Cooper, PJ Porebski, M Chruszcz, W Minor
Expert opinion on drug discovery 6 (8), 771-782, 2011
722011
The structure of the FERM domain of merlin, the neurofibromatosis type 2 gene product
BS Kang, DR Cooper, Y Devedjiev, U Derewenda, ZS Derewenda
Acta Crystallographica Section D: Biological Crystallography 58 (3), 381-391, 2002
692002
The structure and ligand binding properties of the B. subtilis YkoF gene product, a member of a novel family of thiamin/HMP-binding proteins
Y Devedjiev, Y Surendranath, U Derewenda, A Gabrys, DR Cooper, ...
Journal of molecular biology 343 (2), 395-406, 2004
582004
Albumin-based transport of nonsteroidal anti-inflammatory drugs in mammalian blood plasma
MP Czub, KB Handing, BS Venkataramany, DR Cooper, IG Shabalin, ...
Journal of medicinal chemistry 63 (13), 6847-6862, 2020
512020
Aspirin in patients admitted to hospital with COVID-19 (RECOVERY): a randomised, controlled, open-label, platform trial
O Abani, A Abbas, F Abbas, M Abbas, S Abbasi, H Abbass, A Abbott, ...
The Lancet 399 (10320), 143-151, 2022
472022
Structure and Function of Bacillus subtilis YphP, a Prokaryotic Disulfide Isomerase with a CXC Catalytic Motif,
U Derewenda, T Boczek, KL Gorres, M Yu, L Hung, D Cooper, ...
Biochemistry 48 (36), 8664-8671, 2009
372009
Structure of Thermotoga maritima TM0439: implications for the mechanism of bacterial GntR transcription regulators with Zn2+-binding FCD domains
M Zheng, DR Cooper, NE Grossoehme, M Yu, LW Hung, M Cieslik, ...
Acta Crystallographica Section D: Biological Crystallography 65 (4), 356-365, 2009
342009
Molstack—Interactive visualization tool for presentation, interpretation, and validation of macromolecules and electron density maps
PJ Porebski, P Sroka, H Zheng, DR Cooper, W Minor
Protein Science 27 (1), 86-94, 2018
302018
CMM—An enhanced platform for interactive validation of metal binding sites
M Gucwa, J Lenkiewicz, H Zheng, M Cymborowski, DR Cooper, K Murzyn, ...
Protein Science 32 (1), e4525, 2023
272023
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