| Proline: an efficient and user-friendly software suite for large-scale proteomics D Bouyssié, AM Hesse, E Mouton-Barbosa, M Rompais, C Macron, ... Bioinformatics 36 (10), 3148-3155, 2020 | 184 | 2020 |
| In-depth exploration of cerebrospinal fluid by combining peptide ligand library treatment and label-free protein quantification E Mouton-Barbosa, F Roux-Dalvai, D Bouyssié, F Berger, E Schmidt, ... Molecular & Cellular Proteomics 9 (5), 1006-1021, 2010 | 136 | 2010 |
| Mascot file parsing and quantification (MFPaQ), a new software to parse, validate, and quantify proteomics data generated by ICAT and SILAC mass spectrometric analyses … D Bouyssie, AG de Peredo, E Mouton, R Albigot, L Roussel, N Ortega, ... Molecular & Cellular Proteomics 6 (9), 1621-1637, 2007 | 106 | 2007 |
| Quantitative proteomics reveals a dynamic association of proteins to detergent-resistant membranes upon elicitor signaling in tobacco T Stanislas, D Bouyssie, M Rossignol, S Vesa, J Fromentin, J Morel, ... Molecular & Cellular Proteomics 8 (9), 2186-2198, 2009 | 96 | 2009 |
| Label-free quantification and shotgun analysis of complex proteomes by one-dimensional SDS-PAGE/NanoLC-MS: evaluation for the large scale analysis of inflammatory human … V Gautier, E Mouton-Barbosa, D Bouyssie, N Delcourt, M Beau, JP Girard, ... Molecular & Cellular Proteomics 11 (8), 527-539, 2012 | 76 | 2012 |
| mzDB: a file format using multiple indexing strategies for the efficient analysis of large LC-MS/MS and SWATH-MS data sets D Bouyssié, M Dubois, S Nasso, AG de Peredo, O Burlet-Schiltz, ... Molecular & Cellular Proteomics 14 (3), 771-781, 2015 | 25 | 2015 |
| HDX-Viewer: interactive 3D visualization of hydrogen–deuterium exchange data D Bouyssie, J Lesne, M Locard-Paulet, R Albigot, O Burlet-Schiltz, ... Bioinformatics 35 (24), 5331-5333, 2019 | 21 | 2019 |
| MFPaQ, a new software to parse, validate, and quantify proteomic data generated by ICAT and SILAC mass spectrometric analyses: application to the proteomic study of membrane … D Bouyssie, A Gonzalez de Peredo, E Mouton, R Albigot, L Roussel, ... Mol. Cell. Proteomics 6, 1621-1637, 2007 | 6 | 2007 |
| Développement de nouveaux outils bioinformatiques pour l'exploitation des données de spectrométrie de masse en protéomique haut-débit D Bouyssié Toulouse 3, 2012 | | 2012 |
| A quantitation module for Phenyx, an implementation compliant with several labelling techniques and enabling the use of various statistics D Bouyssie, A Masselot, R Mylonas, PA Binz MOLECULAR & CELLULAR PROTEOMICS 5 (10), S270-S270, 2006 | | 2006 |
