Prodigal: prokaryotic gene recognition and translation initiation site identification D Hyatt, GL Chen, PF LoCascio, ML Land, FW Larimer, LJ Hauser BMC bioinformatics 11, 1-11, 2010 | 9214 | 2010 |
Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation G Rocap, FW Larimer, J Lamerdin, S Malfatti, P Chain, NA Ahlgren, ... Nature 424 (6952), 1042-1047, 2003 | 1291 | 2003 |
KBase: the United States department of energy systems biology knowledgebase AP Arkin, RW Cottingham, CS Henry, NL Harris, RL Stevens, S Maslov, ... Nature biotechnology 36 (7), 566-569, 2018 | 1103 | 2018 |
Insights from 20 years of bacterial genome sequencing M Land, L Hauser, SR Jun, I Nookaew, MR Leuze, TH Ahn, T Karpinets, ... Functional & integrative genomics 15, 141-161, 2015 | 873 | 2015 |
Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris FW Larimer, P Chain, L Hauser, J Lamerdin, S Malfatti, L Do, ML Land, ... Nature biotechnology 22 (1), 55-61, 2004 | 867 | 2004 |
Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis PSG Chain, E Carniel, FW Larimer, J Lamerdin, PO Stoutland, ... Proceedings of the National Academy of Sciences 101 (38), 13826-13831, 2004 | 802 | 2004 |
The genome of a motile marine Synechococcus B Palenik, B Brahamsha, FW Larimer, M Land, L Hauser, P Chain, ... Nature 424 (6952), 1037-1042, 2003 | 784 | 2003 |
Complete Genome Sequence of the Ammonia-Oxidizing Bacterium and Obligate Chemolithoautotroph Nitrosomonas europaea P Chain, J Lamerdin, F Larimer, W Regala, V Lao, M Land, L Hauser, ... Journal of bacteriology 185 (9), 2759-2773, 2003 | 683 | 2003 |
Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000 H Feil, WS Feil, P Chain, F Larimer, G DiBartolo, A Copeland, A Lykidis, ... Proceedings of the National Academy of Sciences 102 (31), 11064-11069, 2005 | 534 | 2005 |
Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility PSG Chain, VJ Denef, KT Konstantinidis, LM Vergez, L Agulló, VL Reyes, ... Proceedings of the National Academy of Sciences 103 (42), 15280-15287, 2006 | 418 | 2006 |
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods K Mavromatis, N Ivanova, K Barry, H Shapiro, E Goltsman, AC McHardy, ... Nature methods 4 (6), 495-500, 2007 | 416 | 2007 |
Enigmatic, ultrasmall, uncultivated Archaea BJ Baker, LR Comolli, GJ Dick, LJ Hauser, D Hyatt, BD Dill, ML Land, ... Proceedings of the National Academy of Sciences 107 (19), 8806-8811, 2010 | 350 | 2010 |
The Evolution of Host Specialization in the Vertebrate Gut Symbiont Lactobacillus reuteri SA Frese, AK Benson, GW Tannock, DM Loach, J Kim, M Zhang, PL Oh, ... PLoS genetics 7 (2), e1001314, 2011 | 349 | 2011 |
Mechanisms of thermal adaptation revealed from the genomes of the Antarctic Archaea Methanogenium frigidum and Methanococcoides burtonii NFW Saunders, T Thomas, PMG Curmi, JS Mattick, E Kuczek, R Slade, ... Genome research 13 (7), 1580-1588, 2003 | 324 | 2003 |
Deinococcus geothermalis: The Pool of Extreme Radiation Resistance Genes Shrinks KS Makarova, MV Omelchenko, EK Gaidamakova, VY Matrosova, ... PLoS One 2 (9), e955, 2007 | 291 | 2007 |
Whole-genome analyses of speciation events in pathogenic Brucellae PSG Chain, DJ Comerci, ME Tolmasky, FW Larimer, SA Malfatti, ... Infection and immunity 73 (12), 8353-8361, 2005 | 286 | 2005 |
Genome of the Epsilonproteobacterial Chemolithoautotroph Sulfurimonas denitrificans SM Sievert, KM Scott, MG Klotz, PSG Chain, LJ Hauser, J Hemp, ... Applied and environmental microbiology 74 (4), 1145-1156, 2008 | 269 | 2008 |
Human chromosome 19 and related regions in mouse: conservative and lineage-specific evolution P Dehal, P Predki, AS Olsen, A Kobayashi, P Folta, S Lucas, M Land, ... Science 293 (5527), 104-111, 2001 | 252 | 2001 |
Complete Genome Sequence of Nitrosospira multiformis, an Ammonia-Oxidizing Bacterium from the Soil Environment JM Norton, MG Klotz, LY Stein, DJ Arp, PJ Bottomley, PSG Chain, ... Applied and environmental microbiology 74 (11), 3559-3572, 2008 | 250 | 2008 |
Genome Sequence of the Chemolithoautotrophic Nitrite-Oxidizing Bacterium Nitrobacter winogradskyi Nb-255 SR Starkenburg, PSG Chain, LA Sayavedra-Soto, L Hauser, ML Land, ... Applied and environmental microbiology 72 (3), 2050-2063, 2006 | 243 | 2006 |