| Expanded encyclopaedias of DNA elements in the human and mouse genomes JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ... Nature 583 (7818), 699-710, 2020 | 1309 | 2020 |
| Tau PTM profiles identify patient heterogeneity and stages of Alzheimer’s disease H Wesseling, W Mair, M Kumar, CN Schlaffner, S Tang, P Beerepoot, ... Cell 183 (6), 1699-1713. e13, 2020 | 457 | 2020 |
| Perspectives on ENCODE MP Snyder, TR Gingeras, JE Moore, Z Weng, MB Gerstein, B Ren, ... Nature 583 (7818), 693-698, 2020 | 100 | 2020 |
| Common mouse models of tauopathy reflect early but not late human disease K Wenger, A Viode, CN Schlaffner, P van Zalm, L Cheng, T Dellovade, ... Molecular Neurodegeneration 18 (1), 1-15, 2023 | 18 | 2023 |
| Fast, quantitative and variant enabled mapping of peptides to genomes CN Schlaffner, GJ Pirklbauer, A Bender, JS Choudhary Cell Systems 5 (2), 152-156. e4, 2017 | 12 | 2017 |
| A Parallelization Strategy for the Time Efficient Analysis of Thousands of LC/MS Runs in High-Performance Computing Environment P van Zalm, A Viodé, K Smolen, B Fatou, AN Hayati, CN Schlaffner, ... Journal of Proteome Research 21 (11), 2810-2814, 2022 | 5 | 2022 |
| Integrative systems biology characterizes immune-mediated neurodevelopmental changes in murine Zika virus microcephaly K Fujimura, AJ Guise, T Nakayama, CN Schlaffner, A Meziani, M Kumar, ... Iscience 26 (7), 2023 | 3 | 2023 |
| FLEXIQuant-LF to quantify protein modification extent in label-free proteomics data CN Schlaffner, K Kahnert, J Muntel, R Chauhan, BY Renard, JA Steen, ... Elife 9, e58783, 2020 | 3 | 2020 |
| A fast and quantitative method for post-translational modification and variant enabled mapping of peptides to genomes CN Schlaffner, GJ Pirklbauer, A Bender, JAJ Steen, JS Choudhary JoVE (Journal of Visualized Experiments), e57633, 2018 | 3 | 2018 |
| Urine Proteomics Reveals Sex-Specific Response to Total Pancreatectomy With Islet Autotransplantation TB Bennike, K Templeton, K Fujimura, MD Bellin, S Ahmed, CN Schlaffner, ... Pancreas 51 (5), 435-444, 2022 | 2 | 2022 |
| multiFLEX-LF: A Computational Approach to Quantify the Modification Stoichiometries in Label-Free Proteomics Data Sets P Hiort, CN Schlaffner, JA Steen, BY Renard, H Steen Journal of Proteome Research 21 (4), 899-909, 2022 | 2 | 2022 |
| FLEXIQuant-LF: Robust Regression to Quantify Protein Modification Extent in Label-Free Proteomics Data K Kahnert, CN Schlaffner, J Muntel, R Chauhan, BY Renard, JA Steen, ... bioRxiv, 2020.05. 11.088492, 2020 | 2 | 2020 |
| Alzheimer proteopathic tau seeds are biochemically a forme fruste of mature paired helical filaments M Kumar, N Quittot, S Dujardin, CN Schlaffner, A Viode, A Wiedmer, ... Brain 147 (2), 637-648, 2024 | 1 | 2024 |
| PEPerMINT: Peptide Abundance Imputation in Mass Spectrometry-based Proteomics using Graph Neural Networks T Pietz, S Gupta, CN Schlaffner, S Ahmed, H Steen, BY Renard, K Baum bioRxiv, 2024.03. 23.586248, 2024 | 1 | 2024 |
| Proteogenomics for Personalised Molecular Profiling CN Schlaffner University of Cambridge, 2018 | 1 | 2018 |
| PoGo: Jumping from Peptides to Genomic Loci CN Schlaffner, G Pirklbauer, A Bender, JS Choudhary bioRxiv, 079772, 2016 | 1 | 2016 |
