| Paralog knockout profiling identifies DUSP4 and DUSP6 as a digenic dependence in MAPK pathway-driven cancers T Ito, MJ Young, R Li, S Jain, A Wernitznig, JM Krill-Burger, CT Lemke, ... Nature genetics 53 (12), 1664-1672, 2021 | 93 | 2021 |
| TCF7L1 modulates colorectal cancer growth by inhibiting expression of the tumor-suppressor gene EPHB3 M Murphy, SS Chatterjee, S Jain, M Katari, R DasGupta Scientific Reports 6 (1), 28299, 2016 | 52 | 2016 |
| Molecular basis for substrate recruitment to the PRMT5 methylosome KM Mulvaney, C Blomquist, N Acharya, R Li, MJ Ranaghan, M O’Keefe, ... Molecular cell 81 (17), 3481-3495. e7, 2021 | 51 | 2021 |
| GEMINI: a variational Bayesian approach to identify genetic interactions from combinatorial CRISPR screens M Zamanighomi, SS Jain, T Ito, D Pal, TP Daley, WR Sellers Genome biology 20, 1-10, 2019 | 46 | 2019 |
| Immune characterization and profiles of SARS-CoV-2 infected patients reveals potential host therapeutic targets and SARS-CoV-2 oncogenesis mechanism M Policard, S Jain, S Rego, S Dakshanamurthy Virus Research 301, 198464, 2021 | 29 | 2021 |
| Low dose chronic angiotensin II induces selective senescence of kidney endothelial cells I Khan, MO Schmidt, B Kallakury, S Jain, S Mehdikhani, M Levi, ... Frontiers in Cell and Developmental Biology 9, 782841, 2021 | 13 | 2021 |
| Integrative analysis of DNA methylation and microRNA expression reveals mechanisms of racial heterogeneity in hepatocellular carcinoma RS Varghese, ME Barefoot, S Jain, Y Chen, Y Zhang, A Alley, ... Frontiers in genetics 12, 708326, 2021 | 10 | 2021 |
| Circulating cell-free methylated DNA reveals tissue-specific, cellular damage from radiation treatment ME McNamara, N Loyfer, AJ Kiliti, MO Schmidt, S Shabi-Porat, SS Jain, ... JCI insight 8 (14), 2023 | 9 | 2023 |
| RNASeq profiling of COVID19‐infected patients identified an EIF2AK2 inhibitor as a potent SARS‐CoV‐2 antiviral S Jain, S Rego, S Park, Y Liu, S Parn, K Savsani, DS Perlin, ... Clinical and Translational Medicine 12 (11), 2022 | 6 | 2022 |
| Cell-free, methylated DNA in blood samples reveals tissue-specific, cellular damage from radiation treatment ME Barefoot, N Loyfer, AJ Kiliti, MO Schmidt, S Shabi-Porat, S Jain, ... bioRxiv, 2022.04. 12.487966, 2022 | 2 | 2022 |
| The Role of Aging and Senescence in Immune Checkpoint Inhibitor Response and Toxicity SS Jain, G Burton Sojo, H Sun, BN Friedland, ME McNamara, ... International Journal of Molecular Sciences 25 (13), 7013, 2024 | | 2024 |
| Circulating, cell-free methylated DNA indicates cellular sources of allograft injury after liver transplant ME McNamara, SS Jain, K Oza, V Muralidaran, AJ Kiliti, AP McDeed, ... bioRxiv, 2024 | | 2024 |
| Bayesian Approach Integrating Prior Knowledge for Identifying miRNA-mRNA Interactions in Hepatocellular Carcinoma Y Guo, M Denis, RS Varghese, SS Jain, MG Tadesse, HW Ressom 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2023 | | 2023 |
| Deconvolution of immune cell composition and biological age of hepatocellular carcinoma using DNA methylation SS Jain, ME McNamara, RS Varghese, HW Ressom Methods 218, 125-132, 2023 | | 2023 |
| Cell-type Deconvolution and Age Estimation Using DNA Methylation Reveals NK Cell Deficiency in the Hepatocellular Carcinoma Microenvironment SS Jain, ME Barefoot, RS Varghese, HW Ressom 2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2022 | | 2022 |
| Large scale profiling of SARS-CoV-2-infected patients identified potential therapeutic host targets and drug candidates for COVID-19 S Jain, S Rego, S Dakshanamurthy | | 2021 |
