flDPnn: Accurate intrinsic disorder prediction with putative propensities of disorder functions G Hu, A Katuwawala, K Wang, Z Wu, S Ghadermarzi, J Gao, L Kurgan Nature communications 12 (1), 4438, 2021 | 173 | 2021 |
Computational prediction of functions of intrinsically disordered regions A Katuwawala, S Ghadermarzi, L Kurgan Progress in Molecular Biology and Translational Science 166, 341-369, 2019 | 35 | 2019 |
Prediction of protein-binding residues: dichotomy of sequence-based methods developed using structured complexes versus disordered proteins J Zhang, S Ghadermarzi, L Kurgan Bioinformatics 36 (18), 4729-4738, 2020 | 23 | 2020 |
Sequence-derived markers of drug targets and potentially druggable human proteins S Ghadermarzi, X Li, M Li, L Kurgan Frontiers in Genetics 10, 1075, 2019 | 21 | 2019 |
DNAgenie: accurate prediction of DNA-type-specific binding residues in protein sequences J Zhang, S Ghadermarzi, A Katuwawala, L Kurgan Briefings in Bioinformatics 22 (6), bbab336, 2021 | 15 | 2021 |
Comparative evaluation of AlphaFold2 and disorder predictors for prediction of intrinsic disorder, disorder content and fully disordered proteins B Zhao, S Ghadermarzi, L Kurgan Computational and Structural Biotechnology Journal 21, 3248-3258, 2023 | 12 | 2023 |
Tutorial: a guide for the selection of fast and accurate computational tools for the prediction of intrinsic disorder in proteins L Kurgan, G Hu, K Wang, S Ghadermarzi, B Zhao, N Malhis, G Erdős, ... Nature Protocols 18 (11), 3157-3172, 2023 | 8 | 2023 |
XRRpred: accurate predictor of crystal structure quality from protein sequence S Ghadermarzi, B Krawczyk, J Song, L Kurgan Bioinformatics 37 (23), 4366-4374, 2021 | 6 | 2021 |
QUARTERplus: Accurate disorder predictions integrated with interpretable residue-level quality assessment scores A Katuwawala, S Ghadermarzi, G Hu, Z Wu, L Kurgan Computational and Structural Biotechnology Journal 19, 2597-2606, 2021 | 6 | 2021 |
Cell2sentence: Teaching large language models the language of biology D Levine, S Lévy, SA Rizvi, N Pallikkavaliyaveetil, X Chen, D Zhang, ... bioRxiv, 2023.09. 11.557287, 2023 | 3 | 2023 |
Disordered Function Conjunction: On the in-silico function annotation of intrinsically disordered regions S Ghadermarzi, A Katuwawala, CJ Oldfield, A Barik, L Kurgan PACIFIC SYMPOSIUM ON BIOCOMPUTING 2020, 171-182, 2019 | 3 | 2019 |
Computational Analysis of Drug Targets and Prediction of Protein-Compound Interactions S Ghadermarzi | | 2022 |
Disordered Function Conjunction S Ghadermarzi, A Katuwawala, CJ Oldfield, A Barik, L Kurgan | | |