PLMD: an updated data resource of protein lysine modifications H Xu, J Zhou, S Lin, W Deng, Y Zhang, Y Xue Journal of Genetics and Genomics 44 (5), 243-250, 2017 | 209 | 2017 |
GPS-PAIL: prediction of lysine acetyltransferase-specific modification sites from protein sequences W Deng, C Wang, Y Zhang, Y Xu, S Zhang, Z Liu, Y Xue Scientific reports 6 (1), 39787, 2016 | 119 | 2016 |
WERAM: a database of writers, erasers and readers of histone acetylation and methylation in eukaryotes Y Xu, S Zhang, S Lin, Y Guo, W Deng, Y Zhang, Y Xue Nucleic acids research, gkw1011, 2016 | 101 | 2016 |
Computational prediction of methylation types of covalently modified lysine and arginine residues in proteins W Deng, Y Wang, L Ma, Y Zhang, S Ullah, Y Xue Briefings in Bioinformatics 18 (4), 647-658, 2017 | 90 | 2017 |
dbPAF: an integrative database of protein phosphorylation in animals and fungi S Ullah, S Lin, Y Xu, W Deng, L Ma, Y Zhang, Z Liu, Y Xue Scientific reports 6 (1), 23534, 2016 | 79 | 2016 |
iUUCD 2.0: an update with rich annotations for ubiquitin and ubiquitin-like conjugations J Zhou, Y Xu, S Lin, Y Guo, W Deng, Y Zhang, A Guo, Y Xue Nucleic acids research 46 (D1), D447-D453, 2018 | 74 | 2018 |
CGDB: a database of circadian genes in eukaryotes S Li, K Shui, Y Zhang, Y Lv, W Deng, S Ullah, L Zhang, Y Xue Nucleic acids research, gkw1028, 2016 | 66 | 2016 |
THANATOS: an integrative data resource of proteins and post-translational modifications in the regulation of autophagy W Deng, L Ma, Y Zhang, J Zhou, Y Wang, Z Liu, Y Xue Autophagy 14 (2), 296-310, 2018 | 40 | 2018 |
dbPSP: a curated database for protein phosphorylation sites in prokaryotes Z Pan, B Wang, Y Zhang, Y Wang, S Ullah, R Jian, Z Liu, Y Xue Database 2015, bav031, 2015 | 33 | 2015 |
dbPSP 2.0, an updated database of protein phosphorylation sites in prokaryotes Y Shi, Y Zhang, S Lin, C Wang, J Zhou, D Peng, Y Xue Scientific Data 7 (1), 164, 2020 | 31 | 2020 |
DeepPhagy: a deep learning framework for quantitatively measuring autophagy activity in Saccharomyces cerevisiae Y Zhang, Y Xie, W Liu, W Deng, D Peng, C Wang, H Xu, C Ruan, Y Deng, ... Autophagy 16 (4), 626-640, 2020 | 27* | 2020 |