| MLGL-MP: a multi-label graph learning framework enhanced by pathway interdependence for metabolic pathway prediction BX Du, PC Zhao, B Zhu, SM Yiu, AK Nyamabo, H Yu, JY Shi Bioinformatics 38 (Supplement_1), i325-i332, 2022 | 11 | 2022 |
| Comprehensive Review of Drug–Drug Interaction Prediction Based on Machine Learning: Current Status, Challenges, and Opportunities NN Wang, B Zhu, XL Li, S Liu, JY Shi, DS Cao Journal of Chemical Information and Modeling 64 (1), 96-109, 2023 | 3 | 2023 |
| NNAN: Nearest neighbor attention network to predict drug–microbe associations B Zhu, Y Xu, P Zhao, SM Yiu, H Yu, JY Shi Frontiers in microbiology 13, 846915, 2022 | 1 | 2022 |
| DMGL-MDA: A dual-modal graph learning method for microbe-drug association prediction B Zhu, HY Yu, BX Du, JY Shi Methods 222, 51-56, 2024 | | 2024 |
| GELKcat: An Integration Learning of Substrate Graph with Enzyme Embedding for Kcat prediction BX Du, H Yu, B Zhu, Y Long, M Wu, JY Shi 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2023 | | 2023 |
