| FusionDTA: attention-based feature polymerizer and knowledge distillation for drug-target binding affinity prediction W Yuan, G Chen, CYC Chen Briefings in Bioinformatics 23 (1), bbab506, 2022 | 75 | 2022 |
| Meta learning with graph attention networks for low-data drug discovery Q Lv, G Chen, Z Yang, W Zhong, CYC Chen IEEE Transactions on Neural Networks and Learning Systems, 2023 | 41 | 2023 |
| Predicting drug–target interactions with deep-embedding learning of graphs and sequences W Chen, G Chen, L Zhao, CYC Chen The Journal of Physical Chemistry A 125 (25), 5633-5642, 2021 | 39 | 2021 |
| 3DGT-DDI: 3D graph and text based neural network for drug–drug interaction prediction H He, G Chen, C Yu-Chian Chen Briefings in Bioinformatics 23 (3), bbac134, 2022 | 32 | 2022 |
| Mol2Context-vec: learning molecular representation from context awareness for drug discovery Q Lv, G Chen, L Zhao, W Zhong, C Yu-Chian Chen Briefings in Bioinformatics 22 (6), bbab317, 2021 | 31 | 2021 |
| NHGNN-DTA: a node-adaptive hybrid graph neural network for interpretable drug–target binding affinity prediction H He, G Chen, CYC Chen Bioinformatics 39 (6), btad355, 2023 | 24 | 2023 |
| TCMBank-the largest TCM database provides deep learning-based Chinese-Western medicine exclusion prediction Q Lv, G Chen, H He, Z Yang, L Zhao, K Zhang, CYC Chen Signal Transduction and Targeted Therapy 8 (1), 127, 2023 | 21 | 2023 |
| DSIL-DDI: a domain-invariant substructure interaction learning for generalizable drug–drug interaction prediction Z Tang, G Chen, H Yang, W Zhong, CYC Chen IEEE Transactions on Neural Networks and Learning Systems, 2023 | 18 | 2023 |
| A novel artificial intelligence protocol to investigate potential leads for diabetes mellitus JN Gong, L Zhao, G Chen, X Chen, ZD Chen, CYC Chen Molecular Diversity 25, 1375-1393, 2021 | 13 | 2021 |
| TCMBank: bridges between the largest herbal medicines, chemical ingredients, target proteins, and associated diseases with intelligence text mining Q Lv, G Chen, H He, Z Yang, L Zhao, HY Chen, CYC Chen Chemical Science 14 (39), 10684-10701, 2023 | 12 | 2023 |
| VAERHNN: Voting-averaged ensemble regression and hybrid neural network to investigate potent leads against colorectal cancer G Chen, X Jiang, Q Lv, X Tan, Z Yang, CYC Chen Knowledge-Based Systems 257, 109925, 2022 | 10 | 2022 |
| Adaptive boost approach for possible leads of triple-negative breast cancer G Chen, H He, L Zhao, KB Chen, S Li, CYC Chen Chemometrics and Intelligent Laboratory Systems 231, 104690, 2022 | 9 | 2022 |
| Multi-perspective neural network for dual drug repurposing in Alzheimer’s disease L Zhao, Z Li, G Chen, Y Yin, CYC Chen Knowledge-Based Systems 283, 111195, 2024 | 7 | 2024 |
| Meta-molnet: A cross-domain benchmark for few examples drug discovery Q Lv, G Chen, Z Yang, W Zhong, CYC Chen IEEE Transactions on Neural Networks and Learning Systems, 2024 | 6 | 2024 |
| De novo generation of SARS-CoV-2 antibody CDRH3 with a pre-trained generative large language model H He, B He, L Guan, Y Zhao, F Jiang, G Chen, Q Zhu, CYC Chen, T Li, ... Nature Communications 15 (1), 6867, 2024 | 4 | 2024 |
| Comprehensive View Embedding Learning for Single-Cell Multimodal Integration Z Tang, J Huang, G Chen, CYC Chen Proceedings of the AAAI Conference on Artificial Intelligence 38 (14), 15292 …, 2024 | 4 | 2024 |
| MRI-based automated machine learning model for preoperative identification of variant histology in muscle-invasive bladder carcinoma J Huang, G Chen, H Liu, W Jiang, S Mai, L Zhang, H Zeng, S Wu, ... European Radiology 34 (3), 1804-1815, 2024 | 4 | 2024 |
| Machine learning and graph neural network for finding potential drugs related to multiple myeloma H He, G Chen, CYC Chen New Journal of Chemistry 46 (11), 5188-5200, 2022 | 4 | 2022 |
| Interaction-Based Inductive Bias in Graph Neural Networks: Enhancing Protein-Ligand Binding Affinity Predictions From 3D Structures Z Yang, W Zhong, Q Lv, T Dong, G Chen, CYC Chen IEEE Transactions on Pattern Analysis and Machine Intelligence, 2024 | 3 | 2024 |
| Integrating sequence and graph information for enhanced drug-target affinity prediction H He, G Chen, CYC Chen Science China Information Sciences 67 (2), 129101, 2024 | 3 | 2024 |
