Phylogenomics resolves the timing and pattern of insect evolution B Misof, S Liu, K Meusemann, RS Peters, A Donath, C Mayer, ... Science 346 (6210), 763-767, 2014 | 2559 | 2014 |
Whole-genome analyses resolve early branches in the tree of life of modern birds ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ... Science 346 (6215), 1320-1331, 2014 | 1965 | 2014 |
ExaBayes: massively parallel Bayesian tree inference for the whole-genome era AJ Aberer, K Kobert, A Stamatakis Molecular biology and evolution 31 (10), 2553-2556, 2014 | 437 | 2014 |
Pruning rogue taxa improves phylogenetic accuracy: an efficient algorithm and webservice AJ Aberer, D Krompass, A Stamatakis Systematic biology 62 (1), 162-166, 2013 | 409 | 2013 |
ExaML version 3: a tool for phylogenomic analyses on supercomputers AM Kozlov, AJ Aberer, A Stamatakis Bioinformatics 31 (15), 2577-2579, 2015 | 244 | 2015 |
The evolutionary history of holometabolous insects inferred from transcriptome-based phylogeny and comprehensive morphological data RS Peters, K Meusemann, M Petersen, C Mayer, J Wilbrandt, T Ziesmann, ... BMC evolutionary biology 14, 1-16, 2014 | 189 | 2014 |
RAxML-Light: a tool for computing terabyte phylogenies A Stamatakis, AJ Aberer, C Goll, SA Smith, SA Berger, ... Bioinformatics 28 (15), 2064-2066, 2012 | 162 | 2012 |
The phylogenetic likelihood library T Flouri, F Izquierdo-Carrasco, D Darriba, AJ Aberer, LT Nguyen, BQ Minh, ... Systematic biology 64 (2), 356-362, 2015 | 161 | 2015 |
Decisive data sets in phylogenomics: lessons from studies on the phylogenetic relationships of primarily wingless insects E Dell’Ampio, K Meusemann, NU Szucsich, RS Peters, B Meyer, J Borner, ... Molecular biology and evolution 31 (1), 239-249, 2014 | 133 | 2014 |
Next-generation sequencing reveals the impact of repetitive DNA across phylogenetically closely related genomes of Orobanchaceae M Piednoël, AJ Aberer, GM Schneeweiss, J Macas, P Novak, H Gundlach, ... Molecular Biology and Evolution 29 (11), 3601-3611, 2012 | 84 | 2012 |
Novel parallelization schemes for large-scale likelihood-based phylogenetic inference A Stamatakis, AJ Aberer 2013 IEEE 27th International Symposium on Parallel and Distributed …, 2013 | 59 | 2013 |
Uncovering hidden phylogenetic consensus in large data sets N Pattengale, A Aberer, K Swenson, A Stamatakis, B Moret IEEE/ACM transactions on computational biology and bioinformatics 8 (4), 902-911, 2011 | 50 | 2011 |
A Simple and Accurate Method for Rogue Taxon Identification AJ Aberer, A Stamatakis | 50 | 2011 |
The divisible load balance problem and its application to phylogenetic inference K Kobert, T Flouri, A Aberer, A Stamatakis Algorithms in Bioinformatics: 14th International Workshop, WABI 2014 …, 2014 | 27 | 2014 |
Rapid forward-in-time simulation at the chromosome and genome level AJ Aberer, A Stamatakis BMC bioinformatics 14, 1-13, 2013 | 18 | 2013 |
Boosting the performance of bayesian divergence time estimation with the phylogenetic likelihood library D Darriba, A Aberer, T Flouri, TA Heath, F Izquierdo-Carrasco, ... 2013 IEEE International Symposium on Parallel & Distributed Processing …, 2013 | 18 | 2013 |
An efficient independence sampler for updating branches in Bayesian Markov chain Monte Carlo sampling of phylogenetic trees AJ Aberer, A Stamatakis, F Ronquist Systematic biology 65 (1), 161-176, 2016 | 16 | 2016 |
Parallelized phylogenetic post-analysis on multi-core architectures AJ Aberer, ND Pattengale, A Stamatakis Journal of Computational Science 1 (2), 107-114, 2010 | 14 | 2010 |
Parallel computation of phylogenetic consensus trees AJ Aberer, ND Pattengale, A Stamatakis Procedia Computer Science 1 (1), 1065-1073, 2010 | 11 | 2010 |
Advanced Methods for Phylogenetic Post-Analysis AJ Aberer TUM/LMU, 2011 | 4 | 2011 |