The IL-10/STAT3-mediated anti-inflammatory response: recent developments and future challenges AP Hutchins, D Diez, D Miranda-Saavedra Briefings in functional genomics 12 (6), 489-498, 2013 | 447 | 2013 |
A novel affinity-based method for the isolation of highly purified extracellular vesicles W Nakai, T Yoshida, D Diez, Y Miyatake, T Nishibu, N Imawaka, K Naruse, ... Scientific reports 6 (1), 1-11, 2016 | 433 | 2016 |
Neuronal exosomes facilitate synaptic pruning by up-regulating complement factors in microglia I Bahrini, J Song, D Diez, R Hanayama Scientific reports 5 (1), 7989, 2015 | 210 | 2015 |
Thyroid hormone-regulated mouse cerebral cortex genes are differentially dependent on the source of the hormone: a study in monocarboxylate transporter-8-and deiodinase-2 … B Morte, A Ceballos, D Diez, C Grijota-Martínez, AM Dumitrescu, ... Endocrinology 151 (5), 2381, 2010 | 133 | 2010 |
Systems biology approaches and pathway tools for investigating cardiovascular disease CE Wheelock, ÅM Wheelock, S Kawashima, D Diez, M Kanehisa, ... Mol. BioSyst. 5 (6), 588-602, 2009 | 114 | 2009 |
The use of network analyses for elucidating mechanisms in cardiovascular disease D Diez, ÅM Wheelock, S Goto, JZ Haeggström, G Paulsson-Berne, ... Mol. BioSyst. 6 (2), 289-304, 2010 | 99 | 2010 |
Distinct transcriptional regulatory modules underlie STAT3’s cell type-independent and cell type-specific functions AP Hutchins, D Diez, Y Takahashi, S Ahmad, R Jauch, ML Tremblay, ... Nucleic Acids Research 41 (4), 2155-70, 2013 | 96 | 2013 |
The repertoires of ubiquitinating and deubiquitinating enzymes in eukaryotic genomes AP Hutchins, S Liu, D Diez, D Miranda-Saavedra Molecular biology and evolution 30 (5), 1172-1187, 2013 | 93 | 2013 |
Thyroid hormone action in the adult brain: gene expression profiling of the effects of single and multiple doses of triiodo-L-thyronine in the rat striatum D Diez, C Grijota-Martinez, P Agretti, G De Marco, M Tonacchera, ... Endocrinology 149 (8), 3989, 2008 | 91 | 2008 |
Lack of action of exogenously administered T3 on the fetal rat brain despite expression of the monocarboxylate transporter 8 C Grijota-Martínez, D Díez, G Morreale de Escobar, J Bernal, B Morte Endocrinology 152 (4), 1713-1721, 2011 | 82 | 2011 |
Thyroid hormone regulation of gene expression in the developing rat fetal cerebral cortex: prominent role of the Ca2+/calmodulin-dependent protein kinase IV pathway B Morte, D Díez, E Ausó, MM Belinchón, P Gil-Ibáñez, C Grijota-Martínez, ... Endocrinology 151 (2), 810, 2010 | 79 | 2010 |
A clustering-independent method for finding differentially expressed genes in single-cell transcriptome data A Vandenbon, D Diez Nature communications 11 (1), 4318, 2020 | 77 | 2020 |
Network analysis in the investigation of chronic respiratory diseases. From basics to application D Diez, A Agustí, CE Wheelock American journal of respiratory and critical care medicine 190 (9), 981-988, 2014 | 51 | 2014 |
PWMEnrich: PWM enrichment analysis R Stojnic, D Diez R package version 4 (0), 10.18129, 2014 | 47 | 2014 |
Genomic and computational approaches to dissect the mechanisms of STAT3’s universal and cell type-specific functions AP Hutchins, D Diez, D Miranda-Saavedra Jak-stat 2 (4), e25097, 2013 | 36 | 2013 |
Evolutionary expansion of the Ras switch regulatory module in eukaryotes D Díez, F Sanchez-Jimenez, JAG Ranea Nucleic acids research 39 (13), 5526-5537, 2011 | 36 | 2011 |
Network analysis identifies a putative role for the PPAR and type 1 interferon pathways in glucocorticoid actions in asthmatics D Diez, S Goto, JV Fahy, DJ Erle, PG Woodruff, ÅM Wheelock, ... BMC medical genomics 5, 1-13, 2012 | 35 | 2012 |
Systematic identification of transcriptional regulatory modules from protein–protein interaction networks D Diez, AP Hutchins, D Miranda-Saavedra Nucleic Acids Research 42 (1), e6-e6, 2014 | 31 | 2014 |
Methods for sequence and structural analysis of B and T cell receptor repertoires S Teraguchi, DS Saputri, MA Llamas-Covarrubias, A Davila, D Diez, ... Computational and Structural Biotechnology Journal 18, 2000-2011, 2020 | 29 | 2020 |
Codelink: an R package for analysis of GE healthcare gene expression bioarrays D Diez, R Alvarez, A Dopazo Bioinformatics 23 (9), 1168, 2007 | 27 | 2007 |