| The human gut microbiome: from association to modulation TSB Schmidt, J Raes, P Bork Cell 172 (6), 1198-1215, 2018 | 733 | 2018 |
| Extensive transmission of microbes along the gastrointestinal tract TSB Schmidt, MR Hayward, LP Coelho, SS Li, PI Costea, AY Voigt, ... elife 8, e42693, 2019 | 400 | 2019 |
| Microbial abundance, activity and population genomic profiling with mOTUs2 A Milanese, DR Mende, L Paoli, G Salazar, HJ Ruscheweyh, M Cuenca, ... Nature communications 10 (1), 1014, 2019 | 367 | 2019 |
| Similarity of the dog and human gut microbiomes in gene content and response to diet LP Coelho, JR Kultima, PI Costea, C Fournier, Y Pan, ... Microbiome 6, 1-11, 2018 | 272 | 2018 |
| Disentangling the mechanisms shaping the surface ocean microbiota R Logares, IM Deutschmann, PC Junger, CR Giner, AK Krabberød, ... Microbiome 8, 1-17, 2020 | 187* | 2020 |
| Pseudo-transition analysis identifies the key regulators of dynamic metabolic adaptations from steady-state data L Gerosa, BRBH Van Rijsewijk, D Christodoulou, K Kochanowski, ... Cell systems 1 (4), 270-282, 2015 | 171 | 2015 |
| Microbiota-derived hydrogen fuels Salmonella typhimurium invasion of the gut ecosystem L Maier, R Vyas, CD Cordova, H Lindsay, TSB Schmidt, S Brugiroux, ... Cell host & microbe 14 (6), 641-651, 2013 | 170 | 2013 |
| A faecal microbiota signature with high specificity for pancreatic cancer E Kartal, TSB Schmidt, E Molina-Montes, S Rodríguez-Perales, J Wirbel, ... Gut 71 (7), 1359-1372, 2022 | 145 | 2022 |
| Combinatorial, additive and dose-dependent drug–microbiome associations SK Forslund, R Chakaroun, M Zimmermann-Kogadeeva, L Markó, ... Nature 600 (7889), 500-505, 2021 | 135 | 2021 |
| Microbiome and metabolome features of the cardiometabolic disease spectrum S Fromentin, SK Forslund, K Chechi, J Aron-Wisnewsky, R Chakaroun, ... Nature medicine 28 (2), 303-314, 2022 | 128 | 2022 |
| Ecological consistency of SSU rRNA-based operational taxonomic units at a global scale TSB Schmidt, JF Matias Rodrigues, C von Mering PLoS computational biology 10 (4), e1003594, 2014 | 126 | 2014 |
| Limits to robustness and reproducibility in the demarcation of operational taxonomic units TSB Schmidt, JF Matias Rodrigues, C von Mering Environmental microbiology 17 (5), 1689-1706, 2015 | 124 | 2015 |
| GUNC: detection of chimerism and contamination in prokaryotic genomes A Orakov, A Fullam, LP Coelho, S Khedkar, D Szklarczyk, DR Mende, ... Genome biology 22, 1-19, 2021 | 123 | 2021 |
| MAPseq: highly efficient k-mer search with confidence estimates, for rRNA sequence analysis JF Matias Rodrigues, TSB Schmidt, J Tackmann, C von Mering Bioinformatics 33 (23), 3808-3810, 2017 | 114 | 2017 |
| Towards the biogeography of prokaryotic genes LP Coelho, R Alves, ÁR Del Río, PN Myers, CP Cantalapiedra, ... Nature 601 (7892), 252-256, 2022 | 104 | 2022 |
| Analyses of dryland biological soil crusts highlight lichens as an important regulator of microbial communities S Maier, TSB Schmidt, L Zheng, T Peer, V Wagner, M Grube Biodiversity and conservation 23 (7), 1735-1755, 2014 | 96 | 2014 |
| Disentangling the impact of environmental and phylogenetic constraints on prokaryotic within-species diversity OM Maistrenko, DR Mende, M Luetge, F Hildebrand, TSB Schmidt, SS Li, ... The ISME journal 14 (5), 1247-1259, 2020 | 91 | 2020 |
| proGenomes2: an improved database for accurate and consistent habitat, taxonomic and functional annotations of prokaryotic genomes DR Mende, I Letunic, OM Maistrenko, TSB Schmidt, A Milanese, L Paoli, ... Nucleic Acids Research 48 (D1), D621-D625, 2020 | 90 | 2020 |
| Drivers and determinants of strain dynamics following fecal microbiota transplantation TSB Schmidt, SS Li, OM Maistrenko, W Akanni, LP Coelho, S Dolai, ... Nature Medicine 28, 1902–1912, 2022 | 89 | 2022 |
| Metagenomic identification of microbial signatures predicting pancreatic cancer from a multinational study N Nagata, S Nishijima, Y Kojima, Y Hisada, K Imbe, T Miyoshi-Akiyama, ... Gastroenterology 163 (1), 222-238, 2022 | 88 | 2022 |
Peer BorkDirector of EMBL Heidelberg在 embl.de 的电子邮件经过验证
