Genome‐wide mapping of the HY5‐mediated genenetworks in Arabidopsis that involve both transcriptional and post‐transcriptional regulation H Zhang, H He, X Wang, X Wang, X Yang, L Li, XW Deng The Plant Journal 65 (3), 346-358, 2011 | 331 | 2011 |
miRDeep-P: a computational tool for analyzing the microRNA transcriptome in plants X Yang, L Li Bioinformatics 27 (18), 2614-2615, 2011 | 297 | 2011 |
PmiREN: a comprehensive encyclopedia of plant miRNAs Z Guo, Z Kuang, Y Wang, Y Zhao, Y Tao, C Cheng, J Yang, X Lu, C Hao, ... Nucleic acids research 48 (D1), D1114-D1121, 2020 | 159 | 2020 |
miRDeep-P2: accurate and fast analysis of the microRNA transcriptome in plants Z Kuang, Y Wang, L Li, X Yang Bioinformatics 35 (14), 2521-2522, 2019 | 107 | 2019 |
Alternative mRNA processing increases the complexity of microRNA‐based gene regulation in Arabidopsis X Yang, H Zhang, L Li The Plant Journal 70 (3), 421-431, 2012 | 84 | 2012 |
PmiREN2. 0: from data annotation to functional exploration of plant microRNAs Z Guo, Z Kuang, Y Zhao, Y Deng, H He, M Wan, Y Tao, D Wang, J Wei, ... Nucleic acids research 50 (D1), D1475-D1482, 2022 | 67 | 2022 |
Image-based high-throughput detection and phenotype evaluation method for multiple lettuce varieties J Du, X Lu, J Fan, Y Qin, X Yang, X Guo Frontiers in Plant Science 11, 563386, 2020 | 52 | 2020 |
H2AK121ub in Arabidopsis associates with a less accessible chromatin state at transcriptional regulation hotspots X Yin, FJ Romero-Campero, P de Los Reyes, P Yan, J Yang, G Tian, ... Nature Communications 12 (1), 315, 2021 | 51 | 2021 |
Global analysis of gene-level microRNA expression in Arabidopsis using deep sequencing data X Yang, H Zhang, L Li Genomics 98 (1), 40-46, 2011 | 49 | 2011 |
GC-rich coding sequences reduce transposon-like, small RNA-mediated transgene silencing LV Sidorenko, T Lee, A Woosley, WA Moskal, SA Bevan, PAO Merlo, ... Nature plants 3 (11), 875-884, 2017 | 34 | 2017 |
Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya R Aryal, X Yang, Q Yu, R Sunkar, L Li, R Ming Bmc Genomics 13, 1-14, 2012 | 33 | 2012 |
Quo vadis microRNAs? B Fromm, A Keller, X Yang, MR Friedlander, KJ Peterson, ... Trends in Genetics 36 (7), 461-463, 2020 | 28 | 2020 |
Identification and characterization of a subset of microRNAs in wheat (Triticum aestivum L.) C Su, X Yang, S Gao, Y Tang, C Zhao, L Li Genomics 103 (4), 298-307, 2014 | 27 | 2014 |
Analyzing the microRNA Transcriptome in Plants Using Deep Sequencing Data X Yang, L Li The Role of Bioinformatics in Agriculture, p281-299, 2014 | 27 | 2014 |
Greenhouse-based vegetable high-throughput phenotyping platform and trait evaluation for large-scale lettuces J Du, J Fan, C Wang, X Lu, Y Zhang, W Wen, S Liao, X Yang, X Guo, ... Computers and Electronics in Agriculture 186, 106193, 2021 | 25 | 2021 |
Establishment of in vitro culture system for Codonopsis pilosula transgenic hairy roots J Yang, X Yang, B Li, X Lu, J Kang, X Cao 3 Biotech 10, 1-8, 2020 | 22 | 2020 |
MicroRNA annotation in plants: current status and challenges Y Zhao, Z Kuang, Y Wang, L Li, X Yang Briefings in Bioinformatics 22 (5), bbab075, 2021 | 17 | 2021 |
LettuceGDB: the community database for lettuce genetics and omics Z Guo, B Li, J Du, F Shen, Y Zhao, Y Deng, Z Kuang, Y Tao, M Wan, X Lu, ... Plant communications 4 (1), 2023 | 16 | 2023 |
Miniature inverted-repeat transposable elements drive rapid microRNA diversification in angiosperms Z Guo, Z Kuang, Y Tao, H Wang, M Wan, C Hao, F Shen, X Yang, L Li Molecular Biology and Evolution 39 (11), msac224, 2022 | 16 | 2022 |
Quantitative phenotyping and evaluation for lettuce leaves of multiple semantic components J Du, B Li, X Lu, X Yang, X Guo, C Zhao Plant Methods 18 (1), 54, 2022 | 14 | 2022 |