DNA sliding in nucleosomes via twist defect propagation revealed by molecular simulations GB Brandani, T Niina, C Tan, S Takada Nucleic acids research 46 (6), 2788-2801, 2018 | 81 | 2018 |
Interfacial self-assembly of a bacterial hydrophobin KM Bromley, RJ Morris, L Hobley, G Brandani, RMC Gillespie, ... Proceedings of the National Academy of Sciences 112 (17), 5419-5424, 2015 | 79 | 2015 |
Sequence-dependent nucleosome sliding in rotation-coupled and uncoupled modes revealed by molecular simulations T Niina, GB Brandani, C Tan, S Takada PLoS computational biology 13 (12), e1005880, 2017 | 56 | 2017 |
Chromatin remodelers couple inchworm motion with twist-defect formation to slide nucleosomal DNA GB Brandani, S Takada PLoS computational biology 14 (11), e1006512, 2018 | 45 | 2018 |
Quantifying disorder through conditional entropy: an application to fluid mixing GB Brandani, M Schor, CE MacPhee, H Grubmüller, U Zachariae, ... PloS one 8 (6), e65617, 2013 | 44 | 2013 |
The bacterial hydrophobin BslA is a switchable ellipsoidal janus nanocolloid GB Brandani, M Schor, R Morris, N Stanley-Wall, CE MacPhee, ... Langmuir 31 (42), 11558-11563, 2015 | 35 | 2015 |
Langmuir–Blodgett technique for anisotropic colloids: Young investigator perspective T Li, K Lilja, RJ Morris, GB Brandani Journal of colloid and interface science 540, 420-438, 2019 | 24 | 2019 |
Colloidal Spherocylinders at an Interface: Flipper Dynamics and Bilayer Formation T Li, G Brandani, D Marenduzzo, PS Clegg Physical review letters 119 (1), 018001, 2017 | 22 | 2017 |
The kinetic landscape of nucleosome assembly: a coarse-grained molecular dynamics study GB Brandani, C Tan, S Takada PLoS computational biology 17 (7), e1009253, 2021 | 20 | 2021 |
Adsorption of the natural protein surfactant Rsn-2 onto liquid interfaces GB Brandani, SJ Vance, M Schor, A Cooper, MW Kennedy, BO Smith, ... Physical Chemistry Chemical Physics 19 (12), 8584-8594, 2017 | 17 | 2017 |
The conformation of interfacially adsorbed ranaspumin-2 is an arrested state on the unfolding pathway RJ Morris, GB Brandani, V Desai, BO Smith, M Schor, CE MacPhee Biophysical journal 111 (4), 732-742, 2016 | 16 | 2016 |
Nucleosomes as allosteric scaffolds for genetic regulation S Takada, GB Brandani, C Tan Current Opinion in Structural Biology 62, 93-101, 2020 | 13 | 2020 |
Translational nucleosome positioning: A computational study J Neipel, G Brandani, H Schiessel Physical Review E 101 (2), 022405, 2020 | 9 | 2020 |
Bi-directional nucleosome sliding by the Chd1 chromatin remodeler integrates intrinsic sequence-dependent and ATP-dependent nucleosome positioning S Park, GB Brandani, T Ha, GD Bowman Nucleic Acids Research 51 (19), 10326-10343, 2023 | 6 | 2023 |
The lane-switch mechanism for nucleosome repositioning by DNA translocase F Nagae, GB Brandani, S Takada, T Terakawa Nucleic Acids Research 49 (16), 9066-9076, 2021 | 6 | 2021 |
Molecular dynamics simulations for the study of chromatin biology GB Brandani, S Gopi, M Yamauchi, S Takada Current Opinion in Structural Biology 77, 102485, 2022 | 4 | 2022 |
Lateral interactions govern self-assembly of the bacterial biofilm matrix protein BslA S Arnaouteli, NC Bamford, GB Brandani, RJ Morris, M Schor, ... Proceedings of the National Academy of Sciences 120 (45), e2312022120, 2023 | 1 | 2023 |
Finite-size scaling in unbiased translocation dynamics G Brandani, F Baldovin, E Orlandini, AL Stella Journal of Statistical Mechanics: Theory and Experiment 2014 (5), P05019, 2014 | 1 | 2014 |
Multiscale Bayesian simulations reveal functional chromatin condensation of gene loci GB Brandani, C Gu, S Gopi, S Takada PNAS Nexus, pgae226, 2024 | | 2024 |
Combining contact frequency and histone modification data to tune a coarse-grained chromatin model WS Chan, GB Brandani, S Takada, H Kono Biophysical Journal 123 (3), 366a, 2024 | | 2024 |