Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines S Atwell, YS Huang, BJ Vilhjálmsson, G Willems, M Horton, Y Li, D Meng, ... Nature 465 (7298), 627-631, 2010 | 1971 | 2010 |
Genome-wide patterns of genetic variation in worldwide Arabidopsis thaliana accessions from the RegMap panel MW Horton, AM Hancock, YS Huang, C Toomajian, S Atwell, A Auton, ... Nature genetics 44 (2), 212-216, 2012 | 594 | 2012 |
Mining coherent dense subgraphs across massive biological networks for functional discovery H Hu, X Yan, Y Huang, J Han, XJ Zhou Bioinformatics 21 (suppl_1), i213-i221, 2005 | 485 | 2005 |
Mining coherent dense subgraphs across massive biological networks for functional discovery H Hu, X Yan, Y Huang, J Han, XJ Zhou Bioinformatics 21 (suppl_1), i213-i221, 2005 | 485 | 2005 |
The Scale of Population Structure in Arabidopsis thaliana A Platt, M Horton, YS Huang, Y Li, AE Anastasio, NW Mulyati, J Ågren, ... PLoS genetics 6 (2), e1000843, 2010 | 414 | 2010 |
A Coastal Cline in Sodium Accumulation in Arabidopsis thaliana Is Driven by Natural Variation of the Sodium Transporter AtHKT1;1 I Baxter, JN Brazelton, D Yu, YS Huang, B Lahner, E Yakubova, Y Li, ... PLoS genetics 6 (11), e1001193, 2010 | 407 | 2010 |
Natural allelic variation underlying a major fitness trade-off in Arabidopsis thaliana M Todesco, S Balasubramanian, TT Hu, MB Traw, M Horton, P Epple, ... Nature 465 (7298), 632-636, 2010 | 390 | 2010 |
Association mapping of local climate-sensitive quantitative trait loci in Arabidopsis thaliana Y Li, Y Huang, J Bergelson, M Nordborg, JO Borevitz Proceedings of the National Academy of Sciences 107 (49), 21199-21204, 2010 | 358 | 2010 |
Genome-wide association studies identify heavy metal ATPase3 as the primary determinant of natural variation in leaf cadmium in Arabidopsis thaliana DY Chao, A Silva, I Baxter, YS Huang, M Nordborg, J Danku, B Lahner, ... PLoS Genet 8 (9), e1002923, 2012 | 283 | 2012 |
GWAPP: a web application for genome-wide association mapping in Arabidopsis Ü Seren, BJ Vilhjálmsson, MW Horton, D Meng, P Forai, YS Huang, ... The Plant Cell 24 (12), 4793-4805, 2012 | 179 | 2012 |
Genome-wide survey of Arabidopsis natural variation in downy mildew resistance using combined association and linkage mapping A Nemri, S Atwell, AM Tarone, YS Huang, K Zhao, DJ Studholme, ... Proceedings of the National Academy of Sciences 107 (22), 10302-10307, 2010 | 141 | 2010 |
The genome of the vervet (Chlorocebus aethiops sabaeus) WC Warren, AJ Jasinska, R García-Pérez, H Svardal, C Tomlinson, ... Genome research 25 (12), 1921-1933, 2015 | 116 | 2015 |
A graph-based approach to systematically reconstruct human transcriptional regulatory modules X Yan, MR Mehan, Y Huang, MS Waterman, PS Yu, XJ Zhou Bioinformatics 23 (13), i577-i586, 2007 | 113 | 2007 |
Systematic discovery of functional modules and context-specific functional annotation of human genome Y Huang, H Li, H Hu, X Yan, MS Waterman, H Huang, XJ Zhou Bioinformatics 23 (13), i222-i229, 2007 | 109 | 2007 |
Ancient hybridization and strong adaptation to viruses across African vervet monkey populations H Svardal, AJ Jasinska, C Apetrei, G Coppola, Y Huang, CA Schmitt, ... Nature Genetics 49 (12), 1705-1713, 2017 | 93 | 2017 |
Genetic variation and gene expression across multiple tissues and developmental stages in a nonhuman primate AJ Jasinska, I Zelaya, SK Service, CB Peterson, RM Cantor, OW Choi, ... Nature genetics 49 (12), 1714-1721, 2017 | 31 | 2017 |
Accurity: accurate tumor purity and ploidy inference from tumor-normal WGS data by jointly modelling somatic copy number alterations and heterozygous germline single-nucleotide … Z Luo, X Fan, Y Su, YS Huang Bioinformatics 34 (12), 2004-2011, 2018 | 26 | 2018 |
Integrative Array Analyzer: a software package for analysis of cross-platform and cross-species microarray data F Pan, K Kamath, K Zhang, S Pulapura, A Achar, J Nunez-Iglesias, ... Bioinformatics 22 (13), 1665-1667, 2006 | 25 | 2006 |
Sequencing strategies and characterization of 721 vervet monkey genomes for future genetic analyses of medically relevant traits YS Huang, V Ramensky, SK Service, AJ Jasinska, Y Jung, OW Choi, ... BMC biology 13, 1-10, 2015 | 22 | 2015 |
Analysis and visualization of Arabidopsis thaliana GWAS using web 2.0 technologies YS Huang, M Horton, BJ Vilhjalmsson, Ü Seren, D Meng, C Meyer, ... Database 2011, bar014, 2011 | 12 | 2011 |