| Single cell molecular alterations reveal target cells and pathways of concussive brain injury D Arneson, G Zhang, Z Ying, Y Zhuang, HR Byun, IS Ahn, ... Nature communications 9 (1), 3894, 2018 | 138 | 2018 |
| Single cell analysis reveals immune cell–adipocyte crosstalk regulating the transcription of thermogenic adipocytes P Rajbhandari, D Arneson, SK Hart, IS Ahn, G Diamante, LC Santos, ... Elife 8, e49501, 2019 | 137 | 2019 |
| Hypothalamic oestrogen receptor alpha establishes a sexually dimorphic regulatory node of energy expenditure JE van Veen, LG Kammel, PC Bunda, M Shum, MS Reid, MG Massa, ... Nature metabolism 2 (4), 351-363, 2020 | 72 | 2020 |
| Mergeomics: a web server for identifying pathological pathways, networks, and key regulators via multidimensional data integration D Arneson, A Bhattacharya, L Shu, VP Mäkinen, X Yang BMC genomics 17, 1-9, 2016 | 64 | 2016 |
| Network modeling of single-cell omics data: challenges, opportunities, and progresses M Blencowe, D Arneson, J Ding, YW Chen, Z Saleem, X Yang Emerging topics in life sciences 3 (4), 379-398, 2019 | 57 | 2019 |
| Joint cell segmentation and cell type annotation for spatial transcriptomics R Littman, Z Hemminger, R Foreman, D Arneson, G Zhang, ... Molecular systems biology 17 (6), e10108, 2021 | 55* | 2021 |
| Shared mechanisms among neurodegenerative diseases: from genetic factors to gene networks D Arneson, Y Zhang, X Yang, M Narayanan Journal of genetics 97, 795-806, 2018 | 55 | 2018 |
| Single-cell study of two rat models of pulmonary arterial hypertension reveals connections to human pathobiology and drug repositioning J Hong, D Arneson, S Umar, G Ruffenach, CM Cunningham, IS Ahn, ... American journal of respiratory and critical care medicine 203 (8), 1006-1022, 2021 | 48 | 2021 |
| MethylResolver—a method for deconvoluting bulk DNA methylation profiles into known and unknown cell contents D Arneson, X Yang, K Wang Communications biology 3 (1), 422, 2020 | 47 | 2020 |
| Multi-omics integration reveals molecular networks and regulators of psoriasis Y Zhao, D Jhamb, L Shu, D Arneson, DK Rajpal, X Yang BMC systems biology 13, 1-14, 2019 | 44 | 2019 |
| Multidimensional integrative genomics approaches to dissecting cardiovascular disease D Arneson, L Shu, B Tsai, R Barrere-Cain, C Sun, X Yang Frontiers in cardiovascular medicine 4, 8, 2017 | 34 | 2017 |
| Mutant NRASQ61 shares signaling similarities across various cancer types–potential implications for future therapies I Vujic, C Posch, M Sanlorenzo, AJ Yen, A Tsumura, A Kwong, ... Oncotarget 5 (17), 7936, 2014 | 31 | 2014 |
| Estrogen receptor alpha in the brain mediates tamoxifen-induced changes in physiology in mice Z Zhang, JW Park, IS Ahn, G Diamante, N Sivakumar, D Arneson, X Yang, ... Elife 10, e63333, 2021 | 26 | 2021 |
| Single‐cell transcriptomic profiling of satellite glial cells in stellate ganglia reveals developmental and functional axial dynamics VYH van Weperen, RJ Littman, DV Arneson, J Contreras, X Yang, ... Glia 69 (5), 1281-1291, 2021 | 19 | 2021 |
| Open challenges in developing digital therapeutics in the United States BY Miao, D Arneson, M Wang, AJ Butte PLOS Digital Health 1 (1), e0000008, 2022 | 18 | 2022 |
| CovidCounties is an interactive real time tracker of the COVID19 pandemic at the level of US counties D Arneson, M Elliott, A Mosenia, B Oskotsky, S Solodar, R Vashisht, ... Scientific data 7 (1), 405, 2020 | 18 | 2020 |
| PharmOmics: A species-and tissue-specific drug signature database and gene-network-based drug repositioning tool YW Chen, G Diamante, J Ding, TX Nghiem, J Yang, SM Ha, P Cohn, ... Iscience 25 (4), 2022 | 17* | 2022 |
| IDOL regulates systemic energy balance through control of neuronal VLDLR expression SD Lee, C Priest, M Bjursell, J Gao, DV Arneson, IS Ahn, G Diamante, ... Nature metabolism 1 (11), 1089-1100, 2019 | 14 | 2019 |
| Systems spatiotemporal dynamics of traumatic brain injury at single-cell resolution reveals humanin as a therapeutic target D Arneson, G Zhang, IS Ahn, Z Ying, G Diamante, I Cely, ... Cellular and Molecular Life Sciences 79 (9), 480, 2022 | 12 | 2022 |
| Mammary duct luminal epithelium controls adipocyte thermogenic programme S Patel, NZR Sparman, D Arneson, A Alvarsson, LC Santos, SJ Duesman, ... Nature 620 (7972), 192-199, 2023 | 10* | 2023 |
