Training signaling pathway maps to biochemical data with constrained fuzzy logic: quantitative analysis of liver cell responses to inflammatory stimuli MK Morris, J Saez-Rodriguez, DC Clarke, PK Sorger, DA Lauffenburger PLoS computational biology 7 (3), e1001099, 2011 | 167 | 2011 |
Overexpression of membrane-associated fatty acid binding protein (FABPpm) in vivo increases fatty acid sarcolemmal transport and metabolism DC Clarke, D Miskovic, XX Han, J Calles-Escandon, JFC Glatz, ... Physiological genomics 17 (1), 31-37, 2004 | 135 | 2004 |
Decoding the quantitative nature of TGF-β/Smad signaling DC Clarke, X Liu Trends in cell biology 18 (9), 430-442, 2008 | 126 | 2008 |
Rationale and resources for teaching the mathematical modeling of athletic training and performance DC Clarke, PF Skiba Advances in physiology education, 2013 | 123 | 2013 |
Transforming growth factor β depletion is the primary determinant of Smad signaling kinetics DC Clarke, ML Brown, RA Erickson, Y Shi, X Liu Molecular and cellular biology 29 (9), 2443-2455, 2009 | 89 | 2009 |
Activation of Mps1 promotes transforming growth factor-β-independent Smad signaling S Zhu, W Wang, DC Clarke, X Liu Journal of Biological Chemistry 282 (25), 18327-18338, 2007 | 84 | 2007 |
Effect of work and recovery durations on W'reconstitution during intermittent exercise. PF Skiba, S Jackman, D Clarke, A Vanhatalo, AM Jones Medicine and science in sports and exercise 46 (7), 1433-1440, 2014 | 81 | 2014 |
Intramuscular determinants of the ability to recover work capacity above critical power PF Skiba, J Fulford, DC Clarke, A Vanhatalo, AM Jones European journal of applied physiology 115, 703-713, 2015 | 80 | 2015 |
Validation of a novel intermittent W′ model for cycling using field data PF Skiba, D Clarke, A Vanhatalo, AM Jones International journal of sports physiology and performance 9 (6), 900-904, 2014 | 77 | 2014 |
Systems theory of Smad signalling DC Clarke, MD Betterton, X Liu IEE Proceedings-Systems Biology 153 (6), 412-424, 2006 | 73 | 2006 |
Linking proteomic and transcriptional data through the interactome and epigenome reveals a map of oncogene-induced signaling SC Huang, DC Clarke, SJC Gosline, A Labadorf, CR Chouinard, ... PLoS computational biology 9 (2), e1002887, 2013 | 59 | 2013 |
Attenuated thermoregulatory, metabolic, and liver acute phase protein response to heat stroke in TNF receptor knockout mice LR Leon, S Dineen, MD Blaha, M Rodriguez-Fernandez, DC Clarke American Journal of Physiology-Regulatory, Integrative and Comparative …, 2013 | 43 | 2013 |
Systematic analysis of quantitative logic model ensembles predicts drug combination effects on cell signaling networks MK Morris, DC Clarke, LC Osimiri, DA Lauffenburger CPT: pharmacometrics & systems pharmacology 5 (10), 544-553, 2016 | 38 | 2016 |
Normalization and statistical analysis of multiplexed bead-based immunoassay data using mixed-effects modeling DC Clarke, MK Morris, DA Lauffenburger Molecular & Cellular Proteomics 12 (1), 245-262, 2013 | 29 | 2013 |
The W′ balance model: Mathematical and methodological considerations PF Skiba, DC Clarke International journal of sports physiology and performance 16 (11), 1561-1572, 2021 | 28 | 2021 |
Low energy availability and relative energy deficiency in sport: what coaches should know BT Charlton, S Forsyth, DC Clarke International Journal of Sports Science & Coaching 17 (2), 445-460, 2022 | 26 | 2022 |
ADP is the dominant controller of AMP-activated protein kinase activity dynamics in skeletal muscle during exercise IF Coccimiglio, DC Clarke PLoS computational biology 16 (7), e1008079, 2020 | 26 | 2020 |
The critical power model as a potential tool for anti-doping MJ Puchowicz, E Mizelman, A Yogev, MS Koehle, NE Townsend, ... Frontiers in physiology 9, 643, 2018 | 23 | 2018 |
Comparing the respiratory compensation point with muscle oxygen saturation in locomotor and non-locomotor muscles using wearable NIRS spectroscopy during whole-body exercise A Yogev, J Arnold, D Clarke, JA Guenette, BC Sporer, MS Koehle Frontiers in physiology 13, 818733, 2022 | 16 | 2022 |
Development and field validation of an omni-domain power-duration model MJ Puchowicz, J Baker, DC Clarke Journal of sports sciences 38 (7), 801-813, 2020 | 16 | 2020 |