| Microbiome definition re-visited: old concepts and new challenges G Berg, D Rybakova, D Fischer, T Cernava, MCC Vergès, T Charles, ... Microbiome 8, 1-22, 2020 | 1005 | 2020 |
| Computational analysis of bacterial RNA-Seq data R McClure, D Balasubramanian, Y Sun, M Bobrovskyy, P Sumby, ... Nucleic acids research 41 (14), e140-e140, 2013 | 601 | 2013 |
| TLR-dependent human mucosal epithelial cell responses to microbial pathogens R McClure, P Massari Frontiers in immunology 5, 386, 2014 | 292 | 2014 |
| Soil microbiomes under climate change and implications for carbon cycling D Naylor, N Sadler, A Bhattacharjee, EB Graham, CR Anderton, ... Annual Review of Environment and Resources 45 (1), 29-59, 2020 | 110 | 2020 |
| Microbiome definition re-visited: old concepts and new challenges. Microbiome 8: 103 G Berg, D Rybakova, D Fischer, T Cernava, MCC Vergès, T Charles, ... | 96 | 2020 |
| The gonococcal transcriptome during infection of the lower genital tract in women R McClure, K Nudel, P Massari, B Tjaden, X Su, PA Rice, CA Genco PloS one 10 (8), e0133982, 2015 | 60 | 2015 |
| Role of Hfq in iron-dependent and-independent gene regulation in Neisseria meningitidis JR Mellin, R McClure, D Lopez, O Green, B Reinhard, C Genco Microbiology 156 (Pt 8), 2316, 2010 | 52 | 2010 |
| Selection, succession, and stabilization of soil microbial consortia EK Zegeye, CJ Brislawn, Y Farris, SJ Fansler, KS Hofmockel, JK Jansson, ... Msystems 4 (4), e00055-19, 2019 | 46 | 2019 |
| Coupling genome-wide transcriptomics and developmental toxicity profiles in zebrafish to characterize polycyclic aromatic hydrocarbon (PAH) hazard P Shankar, MC Geier, L Truong, RS McClure, P Pande, KM Waters, ... International journal of molecular sciences 20 (10), 2570, 2019 | 43 | 2019 |
| Unlocking the constraints of cyanobacterial productivity: acclimations enabling ultrafast growth HC Bernstein, RS McClure, EA Hill, LM Markillie, WB Chrisler, MF Romine, ... MBio 7 (4), e00949-16, 2016 | 40 | 2016 |
| Development of microbiome biobanks–challenges and opportunities MJ Ryan, M Schloter, G Berg, T Kostic, LL Kinkel, K Eversole, JA Macklin, ... Trends in Microbiology 29 (2), 89-92, 2021 | 30 | 2021 |
| Transcriptome analysis of Neisseria gonorrhoeae during natural infection reveals differential expression of antibiotic resistance determinants between men and women K Nudel, R McClure, M Moreau, E Briars, AJ Abrams, B Tjaden, XH Su, ... Msphere 3 (3), e00312-18, 2018 | 29* | 2018 |
| Phenotypic responses to interspecies competition and commensalism in a naturally-derived microbial co-culture N Khan, Y Maezato, RS McClure, CJ Brislawn, JM Mobberley, N Isern, ... Scientific reports 8 (1), 1-9, 2018 | 29 | 2018 |
| Characterization of the Neisseria gonorrhoeae iron and Fur regulatory network C Yu, R McClure, K Nudel, N Daou, CA Genco Journal of bacteriology 198 (16), 2180-2191, 2016 | 28 | 2016 |
| Identification of sRNAs expressed by the human pathogen Neisseria gonorrhoeae under disparate growth conditions R McClure, B Tjaden, C Genco Frontiers in microbiology 5, 456, 2014 | 28 | 2014 |
| Deconstructing the soil microbiome into reduced-complexity functional modules D Naylor, S Fansler, C Brislawn, WC Nelson, KS Hofmockel, JK Jansson, ... MBio 11 (4), e01349-20, 2020 | 23 | 2020 |
| Network analysis of transcriptomics expands regulatory landscapes in Synechococcus sp. PCC 7002 RS McClure, CC Overall, JE McDermott, EA Hill, LM Markillie, LA McCue, ... Nucleic acids research 44 (18), 8810-8825, 2016 | 23 | 2016 |
| Species-specific transcriptomic network inference of interspecies interactions RS McClure, CC Overall, EA Hill, HS Song, M Charania, HC Bernstein, ... The ISME journal 12 (8), 2011-2023, 2018 | 22 | 2018 |
| Trends in microbial community composition and function by soil depth D Naylor, R McClure, J Jansson Microorganisms 10 (3), 540, 2022 | 21 | 2022 |
| Indirect interspecies regulation: transcriptional and physiological responses of a cyanobacterium to heterotrophic partnership HC Bernstein, RS McClure, V Thiel, NC Sadler, YM Kim, WB Chrisler, ... MSystems 2 (2), e00181-16, 2017 | 21* | 2017 |
