| BioSeq-BLM: a platform for analyzing DNA, RNA and protein sequences based on biological language models HL Li, YH Pang, B Liu Nucleic acids research 49 (22), e129-e129, 2021 | 116 | 2021 |
| IDP-Seq2Seq: identification of intrinsically disordered regions based on sequence to sequence learning YJ Tang, YH Pang, B Liu Bioinformatics 36 (21), 5177-5186, 2020 | 110 | 2020 |
| DeepIDP-2L: protein intrinsically disordered region prediction by combining convolutional attention network and hierarchical attention network YJ Tang, YH Pang, B Liu Bioinformatics 38 (5), 1252-1260, 2022 | 23 | 2022 |
| SelfAT-Fold: protein fold recognition based on residue-based and motif-based self-attention networks Y Pang, B Liu IEEE/ACM Transactions on Computational Biology and Bioinformatics 19 (3 …, 2020 | 17 | 2020 |
| A deep neural network model for joint entity and relation extraction Y Pang, J Liu, L Liu, Z Yu, K Zhang IEEE Access 7, 179143-179150, 2019 | 17 | 2019 |
| TransDFL: identification of disordered flexible linkers in proteins by transfer learning Y Pang, B Liu Genomics, Proteomics & Bioinformatics 21 (2), 359-369, 2023 | 10 | 2023 |
| DMFpred: predicting protein disorder molecular functions based on protein cubic language model Y Pang, B Liu PLOS Computational Biology 18 (10), e1010668, 2022 | 6 | 2022 |
| MoRF-FUNCpred: molecular recognition feature function prediction based on multi-label learning and ensemble learning H Li, Y Pang, B Liu, L Yu Frontiers in Pharmacology 13, 856417, 2022 | 5 | 2022 |
| Paragraph coherence detection model based on recurrent neural networks Y Pang, J Liu, J Zhou, K Zhang Advances in Swarm Intelligence: 10th International Conference, ICSI 2019 …, 2019 | 2 | 2019 |
| A novel dual pointer approach for entity mention extraction L Jie, P Yihe, Z Kai, L Lizhen, Y Zhengtao Chinese Journal of Electronics 30 (1), 127-133, 2021 | 1 | 2021 |
| DisoFLAG: accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model Y Pang, B Liu BMC biology 22 (1), 3, 2024 | | 2024 |
| IDP-LM: Prediction of protein intrinsic disorder and disorder functions based on language models Y Pang, B Liu PLOS Computational Biology 19 (11), e1011657, 2023 | | 2023 |
| Applications of Natural Language Processing Techniques in Protein Structure and Function Prediction B Liu, K Yan, YH Pang, J Zhang, JY Shao, YJ Tang, N Wang Machine Learning in Bioinformatics of Protein Sequences: Algorithms …, 2023 | | 2023 |
