| Dereplication of microbial metabolites through database search of mass spectra H Mohimani, A Gurevich, A Shlemov, A Mikheenko, A Korobeynikov, ... Nature communications 9 (1), 4035, 2018 | 279 | 2018 |
| A community resource for paired genomic and metabolomic data mining MA Schorn, S Verhoeven, L Ridder, F Huber, DD Acharya, AA Aksenov, ... Nature Chemical Biology 17 (4), 363-368, 2021 | 110 | 2021 |
| MetaMiner: a scalable peptidogenomics approach for discovery of ribosomal peptide natural products with blind modifications from microbial communities L Cao, A Gurevich, KL Alexander, CB Naman, T Leão, E Glukhov, ... Cell systems 9 (6), 600-608. e4, 2019 | 73 | 2019 |
| MolDiscovery: Learning mass spectrometry fragmentation of small molecules L Cao, M Guler, A Tagirdzhanov, YY Lee, A Gurevich, H Mohimani Nature communications 12 (1), 3718, 2021 | 72 | 2021 |
| A metabolome-and metagenome-wide association network reveals microbial natural products and microbial biotransformation products from the human microbiota L Cao, E Shcherbin, H Mohimani Msystems 4 (4), 10.1128/msystems. 00387-19, 2019 | 25 | 2019 |
| MS2Planner: improved fragmentation spectra coverage in untargeted mass spectrometry by iterative optimized data acquisition Z Zuo, L Cao, LF Nothia, H Mohimani Bioinformatics 37 (Supplement_1), i231-i236, 2021 | 11 | 2021 |
| MetProc: separating measurement artifacts from true metabolites in an untargeted metabolomics experiment MD Chaffin, L Cao, AA Deik, CB Clish, FB Hu, MA Martinez-Gonzalez, ... Journal of proteome research 18 (3), 1446-1450, 2018 | 10 | 2018 |
| HypoRiPPAtlas as an Atlas of hypothetical natural products for mass spectrometry database search YY Lee, M Guler, DN Chigumba, S Wang, N Mittal, C Miller, ... Nature Communications 14 (1), 4219, 2023 | 7 | 2023 |
| TransDiscovery: discovering biotransformation from human microbiota by integrating metagenomic and metabolomic data D Yan, L Cao, M Zhou, H Mohimani Metabolites 12 (2), 119, 2022 | 4 | 2022 |
| genuMet: distinguish genuine untargeted metabolic features without quality control samples L Cao, C Clish, FB Hu, MA Martínez-González, C Razquin, M Bullo-Bonet, ... bioRxiv, 837260, 2019 | 1 | 2019 |
| Discovering type I cis-AT polyketides through computational mass spectrometry and genome mining with Seq2PKS D Yan, M Zhou, A Adduri, Y Zhuang, M Guler, S Liu, H Shin, T Kovach, ... Nature Communications 15 (1), 5356, 2024 | | 2024 |
| Method and system to identify natural products from mass spectrometry and genomics data B Behsaz, L Cao, M Guler, YY Lee, H Mohimani, M Mongia, D Yan US Patent App. 18/076,280, 2023 | | 2023 |
| System for Identifying Structures of Molecular Compounds from Mass Spectrometry Data B Behsaz, L Cao, M Guler, YY Lee, H Mohimani US Patent App. 17/554,690, 2022 | | 2022 |
