A genome-wide association study to identify diagnostic markers for human pathogenic Campylobacter jejuni strains CJ Buchanan, AL Webb, SK Mutschall, P Kruczkiewicz, DOR Barker, ... Frontiers in microbiology 8, 1224, 2017 | 47 | 2017 |
Genomic insights from whole genome sequencing of four clonal outbreak Campylobacter jejuni assessed within the global C. jejuni population CG Clark, C Berry, M Walker, A Petkau, DOR Barker, C Guan, A Reimer, ... BMC genomics 17 (1), 1-16, 2016 | 41 | 2016 |
Monomorphic genotypes within a generalist lineage of Campylobacter jejuni show signs of global dispersion AK Llarena, J Zhang, M Vehkala, N Välimäki, M Hakkinen, ML Hänninen, ... Microbial Genomics 2 (10), 2016 | 37 | 2016 |
Genome-wide identification of geographical segregated genetic markers in Salmonella enterica serovar Typhimurium variant 4,[5],12:i:- F Palma, G Manfreda, M Silva, A Parisi, DOR Barker, EN Taboada, ... Scientific Reports 8 (1), 15251, 2018 | 36 | 2018 |
MIST: A Tool for Rapid in silico Generation of Molecular Data from Bacterial Genome Sequences. P Kruczkiewicz, S Mutschall, D Barker, JE Thomas, GH Van Domselaar, ... Bioinformatics, 316-323, 2013 | 28 | 2013 |
Clinical Metagenomics Is Increasingly Accurate and Affordable to Detect Enteric Bacterial Pathogens in Stool CL Peterson, D Alexander, JCY Chen, H Adam, M Walker, J Ali, J Forbes, ... Microorganisms 10 (2), 441, 2022 | 10 | 2022 |
Rapid Identification of Stable Clusters in Bacterial Populations Using the Adjusted Wallace Coefficient DOR Barker, JA Carriço, P Kruczkiewicz, F Palma, M Rossi, EN Taboada Biorxiv, 299347, 2018 | 10 | 2018 |
INNUENDO whole genome and core genome MLST schemas and datasets for Campylobacter jejuni M Rossi, MSD Silva, BF Ribeiro-Gonçalves, DN Silva, MP Machado, ... Zenodo 4, 2018 | 7 | 2018 |
Campylobacter coli isolated in Brazil typed by core genome Multilocus Sequence Typing shows high genomic diversity in a global context CN Gomes, DOR Barker, S da Silva Duque, EV Che, V Jayamanna, ... Infection, Genetics and Evolution 95, 105018, 2021 | 6 | 2021 |
Antimicrobial resistance genotypes and phenotypes of Campylobacter coli isolated from different sources over a 16-year period in Brazil CN Gomes, F Campioni, DOR Barker, EV Che, S da Silva Duque, ... Journal of Global Antimicrobial Resistance 33, 109-113, 2023 | 4 | 2023 |
Combining analytical epidemiology and genomic surveillance to identify risk factors associated with the spread of antimicrobial resistance in Salmonella enterica subsp … BM Hetman, DL Pearl, DOR Barker, J Robertson, JHE Nash, ... Microbial Genomics 8 (11), 000891, 2022 | 2 | 2022 |
Clinical Metagenomics Is Increasingly Accurate and Affordable to Detect Enteric Bacterial Pathogens in Stool. Microorganisms. 2022; 10 (2): 441 CL Peterson, D Alexander, JCY Chen, H Adam, M Walker, J Ali, J Forbes, ... s Note: MDPI stays neu-tral with regard to jurisdictional claims in …, 2022 | 2 | 2022 |
MMMVI: Detecting SARS-CoV-2 Variants of Concern in Metagenomic Samples DOR Barker, CJ Buchanan, C Landgraff, EN Taboada bioRxiv, 2021 | 1 | 2021 |
Insights on the genomic diversity, virulence and resistance profile of a Campylobacter jejuni strain isolated from a hospitalized patient in Brazil CN Gomes, MR Frazão, AA Seribelli, DOR Barker, EV Che, ... Brazilian Journal of Microbiology, 1-11, 2024 | | 2024 |
MMMVI: Detecting SARS-CoV-2 Variants of Concern in Metagenomic Wastewater Samples (preprint) DOR Barker, C Buchanan, C Landgraff, E Taboada | | 2021 |
Identification of Antimicrobial-resistance Genes in Whole-Genome Sequences of Canadian Campylobacter spp. Isolates Recovered from Poultry or Clinical Sources L Hodges, A Koziol, S Mutschall, D Haldane, D Barker, E Taboada, ... IAFP 2020, 2020 | | 2020 |
Principles for Developing Robust Core Genome Multilocus Sequence Typing Systems DOR Barker University of Lethbridge (Canada), 2018 | | 2018 |
Genomic insights from whole genome sequencing of four clonal outbreak Campylobacter jejuni assessed within the global C. jejuni population. CG Clark, C Berry, M Walker, A Petkau, DOR Barker, GC Guan Cai, ... | | 2017 |
Microbial Genomics J Zhang, M Vehkala, N Välimäki, M Hakkinen, ML Hänninen, M Roasto, ... | | |