| Calling attention to passages for biomedical question answering T Almeida, S Matos European Conference on Information Retrieval, 69-77, 2020 | 13 | 2020 |
| Chemical identification and indexing in PubMed full-text articles using deep learning and heuristics T Almeida, R Antunes, J F. Silva, JR Almeida, S Matos Database 2022, baac047, 2022 | 12 | 2022 |
| BIT. UA at BioASQ 8: Lightweight Neural Document Ranking with Zero-shot Snippet Retrieval. T Almeida, S Matos CLEF (Working Notes), 2020 | 10 | 2020 |
| BIT. UA at MedProcNer: Discovering Medical Procedures in Spanish Using Transformer Models with MCRF and Augmentation. T Almeida, RAA Jonker, R Poudel, JM Silva, S Matos CLEF (Working Notes), 60-72, 2023 | 7 | 2023 |
| Chemical detection and indexing in PubMed full text articles using deep learning and rule-based methods T Almeida, R Antunes, JF Silva, JR Almeida, S Matos CDR 1500, 15943, 2021 | 7 | 2021 |
| Team BIT. UA@ BC8 SympTEMIST Track: A Two-Step Pipeline for Discovering and Normalizing Clinical Symptoms in Spanish. RAA Jonker, T Almeida, S Matos, J Almeida Proceedings of the BioCreative VIII Challenge and Workshop: Curation and …, 2023 | 6 | 2023 |
| Universal Passage Weighting Mecanism (UPWM) in BioASQ 9b. T Almeida, S Matos CLEF (Working Notes), 196-212, 2021 | 6 | 2021 |
| Frugal neural reranking: evaluation on the covid-19 literature T Almeida, S Matos Proceedings of the 1st Workshop on NLP for COVID-19 (Part 2) at EMNLP 2020, 2020 | 6 | 2020 |
| The overview of the BioRED (Biomedical Relation Extraction Dataset) track at BioCreative VIII R Islamaj, PT Lai, CH Wei, L Luo, T Almeida, RAA Jonker, SIR Conceição, ... Database 2024, baae069, 2024 | 5 | 2024 |
| Automatic extraction of medication mentions from tweets—overview of the biocreative VII shared task 3 competition D Weissenbacher, K O’Connor, S Rawal, Y Zhang, RTH Tsai, T Miller, ... Database 2023, baac108, 2023 | 4 | 2023 |
| Microtransactions in the Company’s and the Player’s Perspective: A Manual and Automatic Analysis P Gusmão, T Almeida, F Lopes, Y Muryn, J Martins, M Au-Yong-Oliveira New Knowledge in Information Systems and Technologies: Volume 3, 440-451, 2019 | 4 | 2019 |
| Using Flowise to Streamline Biomedical Data Discovery and Analysis JA Reis, JR Almeida, TM Almeida, JL Oliveira 2024 IEEE 22nd Mediterranean Electrotechnical Conference (MELECON), 695-700, 2024 | 3 | 2024 |
| Exploring efficient zero-shot synthetic dataset generation for Information Retrieval T Almeida, S Matos Findings of the Association for Computational Linguistics: EACL 2024, 1214-1231, 2024 | 3 | 2024 |
| BIT. UA at Biocreative VIII track 1: A joint model for relation classification and novelty detection T Almeida, RAA Jonker, D da Silva, J Almeida, S Matos Proceedings of the BioCreative VIII Challenge and Workshop: Curation and …, 2023 | 3* | 2023 |
| BIT. UA at BioASQ 11B: Two-Stage IR with Synthetic Training and Zero-Shot Answer Generation. T Almeida, RAA Jonker, R Poudel, JM Silva, S Matos CLEF (Working Notes), 37-59, 2023 | 3 | 2023 |
| Deep Learning solutions based on fixed contextualized embeddings from PubMedBERT on BioASQ 10b and traditional IR in Synergy. T Almeida, A Pinho, R Pereira, S Matos CLEF (Working Notes), 204-221, 2022 | 3 | 2022 |
| Drug mention recognition in Twitter posts using a deep learning approach JF Silva, T Almeida, R Antunes, JR Almeida, S Matos Proceedings of the BioCreative VII Challenge Evaluation Workshop, 2021 | 3 | 2021 |
| BioASQ Synergy: A strong and simple baseline rooted in relevance feedback. T Almeida, S Matos CLEF (Working Notes), 188-195, 2021 | 3 | 2021 |
| Towards a Hyperparameter-Free QUBO Formulation for Feature Selection in IR T Almeida, S Matos Working Notes of CLEF, 2024 | 2 | 2024 |
| BIT. UA at MultiCardioNER: Adapting a Multi-head CRF for Cardiology R Jonker, T Almeida, S Matos CLEF Working Notes, 2024 | 2 | 2024 |
